RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 BCL10O95999 233 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 RPS17P08708 135 aaKnown RBP11.33□□□□□ -0.6
USF1-201ENST00000368019 ALOX5P09917 674 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 USP17L7P0C7H9 530 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 DDX6P26196 483 aaKnown RBP eCLIP11.33□□□□□ -0.6
USF1-201ENST00000368019 YWHAQP27348 245 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 MAP4P27816 1152 aaKnown RBP11.33□□□□□ -0.6
USF1-201ENST00000368019 GPR15P49685 360 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 RENBPP51606 427 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 ALDH3A2P51648 485 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 EMX2Q04743 252 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 DAG1Q14118 895 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 CYP51A1Q16850 503 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 XKR7Q5GH72 579 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 TTC23Q5W5X9 447 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 TXNDC8Q6A555 127 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 GRAMD4Q6IC98 578 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 LAYNQ6UX15 382 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 TMEM26Q6ZUK4 368 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 MON1AQ86VX9 555 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 SPPL2CQ8IUH8 684 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 RIMKLAQ8IXN7 391 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 CENPSQ8N2Z9 138 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 CYGBQ8WWM9 190 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 PCED1BQ96HM7 432 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 CELF6Q96J87 481 aaKnown RBP11.33□□□□□ -0.6
USF1-201ENST00000368019 LOXL4Q96JB6 756 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 BTN2A3PQ96KV6 586 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 C1orf74Q96LT6 269 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 C3orf30Q96M34 536 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 ZNF347Q96SE7 839 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 ATOH8Q96SQ7 321 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 KCTD14Q9BQ13 255 aaPredicted RBP11.33□□□□□ -0.6
USF1-201ENST00000368019 FEM1AQ9BSK4 669 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 WDR12Q9GZL7 423 aaKnown RBP11.33□□□□□ -0.6
USF1-201ENST00000368019 FBRSL1Q9HCM7 1045 aaKnown RBP11.33□□□□□ -0.6
USF1-201ENST00000368019 ABCC13Q9NSE7 274 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 TDP1Q9NUW8 608 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 FIS1Q9Y3D6 152 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 NAALAD2Q9Y3Q0 740 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 CHD6Q8TD26 2715 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 CROCCQ5TZA2 2017 aa11.33□□□□□ -0.6
USF1-201ENST00000368019 MYOFQ9NZM1 2061 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 A0A1W2PPW3 197 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 FAM234BA2RU67 622 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 PIP5K1BO14986 540 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 MRPS14O60783 128 aaKnown RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 KERAO60938 352 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 CLPXO76031 633 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ZBTB11O95625 1053 aaPredicted RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 EPOP01588 193 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 GNAO1P09471 354 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ARSAP15289 507 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ZNF37AP17032 561 aaPredicted RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 UGT1A6P19224 532 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 UGT1A1P22309 533 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 UGT1A4P22310 534 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 CCR1P32246 355 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 UGT1A3P35503 534 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 UGT1A5P35504 534 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 LIMK1P53667 647 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 SH3BP2P78314 561 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 LIPEQ05469 1076 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 LCP2Q13094 533 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 IL18R1Q13478 541 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 NFYCQ13952 458 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 SEPT6Q14141 434 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ZNF846Q147U1 533 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 RPS6KA2Q15349 733 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 TAF12Q16514 161 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 NFE2Q16621 373 aaPredicted RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 RGS21Q2M5E4 152 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 TYSND1Q2T9J0 566 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ARTNQ5T4W7 220 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ANKS6Q68DC2 871 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 CLEC6AQ6EIG7 209 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 GTF2IRD2BQ6EKJ0 949 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 CEP68Q76N32 757 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 GPRIN1Q7Z2K8 1008 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 THAP5Q7Z6K1 395 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 GTF2IRD2Q86UP8 949 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 UMODL1-AS1Q8N2C9 162 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 SVOPLQ8N434 492 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 TEX26Q8N6G2 289 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 PTGR2Q8N8N7 351 aaPredicted RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 OR13J1Q8NGT2 312 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 SNRNP27Q8WVK2 155 aaKnown RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 ANKRD49Q8WVL7 239 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 S100ZQ8WXG8 99 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 KIAA1191Q96A73 305 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ISG20Q96AZ6 181 aaKnown RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 TRMT2BQ96GJ1 504 aaKnown RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 ZNF641Q96N77 438 aaPredicted RBP11.32□□□□□ -0.6
USF1-201ENST00000368019 CCDC115Q96NT0 180 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 SLC30A3Q99726 388 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 ACBD6Q9BR61 282 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 DCUN1D5Q9BTE7 237 aa11.32□□□□□ -0.6
USF1-201ENST00000368019 MROQ9BYG7 248 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms