RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 VSIG10LQ86VR7 867 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PSTKQ8IV42 348 aaKnown RBP8.51□□□□□ -1.05
SYNE1-206ENST00000367253 LRRC52Q8N7C0 313 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 ADCY4Q8NFM4 1077 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 OR5T3Q8NGG3 340 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 KCTD13Q8WZ19 329 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 HSPBAP1Q96EW2 488 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 COPS8Q99627 209 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 ETNK2Q9NVF9 386 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 KCND3Q9UK17 655 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 FAM25EA8MYX2 175 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 TEX46H3BTG2 121 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 MRASO14807 208 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 MAGEB3O15480 346 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 C9P02748 559 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PCCBP05166 539 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PROS1P07225 676 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CA3P07451 260 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 UCHL3P15374 230 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PORP16435 677 aaPredicted RBP8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PRLRP16471 622 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 IDUAP35475 653 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CBLBQ13191 982 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 DNAJC14Q6Y2X3 702 aaPredicted RBP8.51□□□□□ -1.05
SYNE1-206ENST00000367253 TFAP2DQ7Z6R9 452 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 SLC26A11Q86WA9 606 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 CBWD2Q8IUF1 395 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 PLXDC1Q8IUK5 500 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 FANK1Q8TC84 345 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 ZFAND2BQ8WV99 257 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 TCEAL7Q9BRU2 100 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 TMEM9BQ9NQ34 198 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 AGPAT5Q9NUQ2 364 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 RGPD2P0DJD1 1756 aa8.51□□□□□ -1.05
SYNE1-206ENST00000367253 A0A1W2PQJ5 194 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 STX16-NPEPL1H3BU86 382 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SNAP91O60641 907 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NR4A1P22736 598 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CCNG1P51959 295 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 HGSNATQ68CP4 663 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 RPTNQ6XPR3 784 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ADHFE1Q8IWW8 467 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SH3RF2Q8TEC5 729 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SMARCD2Q92925 531 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PRR11Q96HE9 360 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CDRT15Q96T59 188 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 RTFDC1Q9BY42 306 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 FAM126AQ9BYI3 521 aaPredicted RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 UNKQ9C0B0 810 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 XPR1Q9UBH6 696 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MGAT4AQ9UM21 535 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NDUFAF1Q9Y375 327 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 KCPQ6ZWJ8 1503 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NPHP3-ACAD11A0A0J9YXS1 232 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SAGE2PA6NJ88 616 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PITPNM1O00562 1244 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ACADLP28330 430 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PRKAG1P54619 331 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 GPR85P60893 370 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SEMG2Q02383 582 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MTM1Q13496 603 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NRF1Q16656 503 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ACSM2BQ68CK6 577 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 KIAA0895LQ68EN5 471 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ZNF613Q6PF04 617 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 DEF8Q6ZN54 512 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SGMS1Q86VZ5 419 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ZADH2Q8N4Q0 377 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 KIAA1958Q8N8K9 716 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SETD6Q8TBK2 473 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ACTRT2Q8TDY3 377 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PAFAH2Q99487 392 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 KCTD10Q9H3F6 313 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ASB8Q9H765 288 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NIT2Q9NQR4 276 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 EIF2B3Q9NR50 452 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 HPF1Q9NWY4 346 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 PPP1R14DQ9NXH3 145 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SORCS3Q9UPU3 1222 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CPQQ9Y646 472 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 LOC110117498-PIK3R3F6TDL0 507 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 STX16O14662 325 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CPSF4O95639 269 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SBK2P0C263 348 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ICAM2P13598 275 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 GRM5P41594 1212 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 GRIA2P42262 883 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 SEPHS1P49903 392 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 LSM3P62310 102 aaKnown RBP8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NOMO3P69849 1222 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 ARG2P78540 354 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CD83Q01151 205 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MYBPHQ13203 477 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 NOMO1Q15155 1222 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 CTC1Q2NKJ3 1217 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 AMIGO1Q86WK6 493 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 AADATQ8N5Z0 425 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 VGLL2Q8N8G2 317 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 BPIFB6Q8NFQ5 453 aa8.5□□□□□ -1.05
SYNE1-206ENST00000367253 MCFD2Q8NI22 146 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms