RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 KLHDC7AQ5VTJ3 777 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLC25A47Q6Q0C1 308 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 PQLC2Q6ZP29 291 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 BTN2A1Q7KYR7 527 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 C5orf24Q7Z6I8 188 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SPICE1Q8N0Z3 855 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF786Q8N393 782 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLC5A8Q8N695 610 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF397Q8NF99 534 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 OR5T2Q8NGG2 359 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 OR10G7Q8NGN6 311 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 OR4Q3Q8NH05 313 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 HUS1BQ8NHY5 278 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FLVCR1-AS1Q8TAF5 88 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 C9orf43Q8TAL5 461 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF564Q8TBZ8 553 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 PHOSPHO2Q8TCD6 241 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ITLN1Q8WWA0 313 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 RBM17Q96I25 401 aaKnown RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 DGAT2Q96PD7 388 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 PRPF18Q99633 342 aaKnown RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 HNRNPABQ99729 332 aaKnown RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM110AQ9BQ89 295 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SPRR2GQ9BYE4 73 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ASPSCR1Q9BZE9 553 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 GPR88Q9GZN0 384 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM49AQ9H0Q0 323 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FZD8Q9H461 694 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 IKZF5Q9H5V7 419 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ELAC1Q9H777 363 aaKnown RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ARNT2Q9HBZ2 717 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 SEPSECSQ9HD40 501 aaKnown RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 AASDHPPTQ9NRN7 309 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 TM7SF3Q9NS93 570 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MAN2C1Q9NTJ4 1040 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ACSS1Q9NUB1 689 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 PKD2L2Q9NZM6 624 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 Q9UF83 564 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 RSPH14Q9UHP6 348 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 PHF11Q9UIL8 331 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 LNPEPQ9UIQ6 1025 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF229Q9UJW7 825 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 CORO2BQ9UQ03 480 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 CARHSP1Q9Y2V2 147 aaKnown RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM96BQ9Y3D0 163 aa-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 MTF2Q9Y483 593 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-54P-201ENST00000365563 A0A1W2PQM1 296 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 A0A1W2PRB8 838 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 E2F8A0AVK6 867 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 POM121BA6NF01 834 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 ZNF233A6NK53 670 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 COLCA2A8K830 154 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 A8MV72 311 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 E7EVH7 732 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 H0YAE9 185 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 K7EQD1 137 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 PDHXO00330 501 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 VCYO14598 125 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 IRAK2O43187 625 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 TSPAN6O43657 245 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 AIREO43918 545 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 PRDM1O75626 825 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 FTCDO95954 541 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 HRGP04196 525 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 PRKAR1AP10644 381 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 RPA1P27694 616 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 PRKAR2BP31323 418 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 HNF1BP35680 557 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 APOBEC1P41238 236 aaKnown RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 KIR2DS4P43632 304 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 RIDAP52758 137 aaKnown RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLC12A3P55017 1021 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 RPS3AP61247 264 aaKnown RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SRPXP78539 464 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 EWSR1Q01844 656 aaKnown RBP eCLIP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 ACY1Q03154 408 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 CHRNDQ07001 517 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 PDE1CQ14123 709 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 TAF11Q15544 211 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 DLG2Q15700 870 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SMAD1Q15797 465 aaKnown RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 C2orf68Q2NKX9 166 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 GALNTL6Q49A17 601 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 TOR1AIP1Q5JTV8 583 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 C9orf66Q5T8R8 295 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SERTAD4-AS1Q5TG53 156 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 LEMD1Q68G75 181 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 SLC25A34Q6PIV7 304 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 CPLX2Q6PUV4 134 aaKnown RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 CORO6Q6QEF8 472 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 GLDNQ6ZMI3 551 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 C3P1Q6ZMU1 363 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 DENND5BQ6ZUT9 1274 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 TMTC3Q6ZXV5 915 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 MOB3CQ70IA8 216 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 EPM2AIP1Q7L775 607 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 GPAT4Q86UL3 456 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 FAM160B2Q86V87 743 aa-0.13□□□□□ -2.43
RNU6-54P-201ENST00000365563 LRRC49Q8IUZ0 686 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms