RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 ZBTB11O95625 1053 aaPredicted RBP18.25■□□□□ 0.51
CLIP2-202ENST00000361545 BDKRB1P46663 353 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 NDUFAF6Q330K2 333 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 PIM3Q86V86 326 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 JAZF1Q86VZ6 243 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 COX18Q8N8Q8 333 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 RASSF1Q9NS23 344 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 FNIP2Q9P278 1114 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 PDPK1O15530 556 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 NPHS1O60500 1241 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 TPST2O60704 377 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 NFKB2Q00653 900 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 SIM2Q14190 667 aaPredicted RBP18.25■□□□□ 0.51
CLIP2-202ENST00000361545 OR7A2PQ8NGA2 310 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 EHD3Q9NZN3 535 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 PPM1HQ9ULR3 514 aa18.25■□□□□ 0.51
CLIP2-202ENST00000361545 RHAGQ02094 409 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 CREB5Q02930 508 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 METTL21CQ5VZV1 264 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 C17orf99Q6UX52 265 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 KBTBD2Q8IY47 623 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 ALG2Q9H553 416 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 TMEM248Q9NWD8 314 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 TAC3Q9UHF0 121 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 A8MUA0 341 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 TMEM150CB9EJG8 249 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 GSC2O15499 205 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 FABP3P05413 133 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 DBTP11182 482 aaKnown RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 IDH3AP50213 366 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 PRAMEF14Q5SWL7 426 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 PRAMEF13Q5VWM6 474 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 FBXO46Q6PJ61 603 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 GALNT8Q9NY28 637 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 PCDH7O60245 1069 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 CD247P20963 164 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 MLLT3P42568 568 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 HMGCS1Q01581 520 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 GPR151Q8TDV0 419 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 LMX1AQ8TE12 382 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 POP5Q969H6 163 aaKnown RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 ARHGEF3Q9NR81 526 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 LRP6O75581 1613 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 ECI2O75521 394 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 BEST1O76090 585 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 PTPN5P54829 565 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 GALNT2Q10471 571 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 PAFAH1B3Q15102 231 aaKnown RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 TNFAIP8L2Q6P589 184 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 OR10T2Q8NGX3 314 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 PEBP4Q96S96 227 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 CIB1Q99828 191 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 CDH22Q9UJ99 828 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 IKZF2Q9UKS7 526 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 FAM149AA5PLN7 773 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 CXorf49A8MYA2 514 aaPredicted RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 TNFRSF11BO00300 401 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 UBXN7O94888 489 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 OR5F1O95221 314 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 DLDP09622 509 aaKnown RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 KCNA5P22460 613 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 PCDH1Q08174 1060 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 SLC8B1Q6J4K2 584 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 ZDHHC24Q6UX98 284 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 HDDC2Q7Z4H3 204 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 RASGRP3Q8IV61 690 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 OR2T34Q8NGX1 318 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 OR2T3Q8NH03 318 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 ITM2CQ9NQX7 267 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 PNO1Q9NRX1 252 aaKnown RBP18.24■□□□□ 0.51
CLIP2-202ENST00000361545 AP4B1Q9Y6B7 739 aa18.24■□□□□ 0.51
CLIP2-202ENST00000361545 OR4E2Q8NGC2 313 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 PIWIL1Q96J94 861 aaKnown RBP18.23■□□□□ 0.51
CLIP2-202ENST00000361545 TMEM109Q9BVC6 243 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 HCN3Q9P1Z3 774 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 SLC22A14Q9Y267 594 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 PRAMEF11O60813 436 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 NR2F6P10588 404 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 NDUFS1P28331 727 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 RAB14P61106 215 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 PTPRCAPQ14761 206 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 SNAPC1Q16533 368 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 HKDC1Q2TB90 917 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 LPCAT4Q643R3 524 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 SETD7Q8WTS6 366 aaKnown RBP18.23■□□□□ 0.51
CLIP2-202ENST00000361545 SMPDL3BQ92485 455 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 SLC35G5Q96KT7 338 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 XYLT2Q9H1B5 865 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 DZANK1Q9NVP4 752 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 B4GALT6Q9UBX8 382 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 SQORQ9Y6N5 450 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 NCK1P16333 377 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 ZNF30P17039 623 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 HSD17B2P37059 387 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 ARRB1P49407 418 aaPredicted RBP18.23■□□□□ 0.51
CLIP2-202ENST00000361545 NCBP2P52298 156 aaKnown RBP eCLIP18.23■□□□□ 0.51
CLIP2-202ENST00000361545 FOLH1Q04609 750 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 BTN2A1Q7KYR7 527 aa18.23■□□□□ 0.51
CLIP2-202ENST00000361545 SLC34A3Q8N130 599 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms