RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 POPDC3Q9HBV1 291 aa13.24□□□□□ -0.29
LDB3-202ENST00000361373 MPZL2O60487 215 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 NIPSNAP2O75323 286 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 MYL9P24844 172 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 ATP5A1P25705 553 aaKnown RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 SUOXP51687 545 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 SPIN4Q56A73 249 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 ABHD13Q7L211 337 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 ZC3HC1Q86WB0 502 aaKnown RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 ENKURQ8TC29 256 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 AP3S1Q92572 193 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 LPGAT1Q92604 370 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 DUSP26Q9BV47 211 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 S100A14Q9HCY8 104 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 VPS29Q9UBQ0 182 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 AGRPO00253 132 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 POP7O75817 140 aaKnown RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 ALPIP09923 528 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 CD247P20963 164 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 WDR45BQ5MNZ6 344 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 DCAF12L1Q5VU92 463 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 MRPL10Q7Z7H8 261 aaKnown RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 FAM98AQ8NCA5 519 aaKnown RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 RGMAQ96B86 450 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 HERC2P3Q9BVR0 1158 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 DNAJB4Q9UDY4 337 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 TMED5Q9Y3A6 229 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 XKRYO14609 159 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 SHOX2O60902 331 aaPredicted RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 PIM1P11309 404 aaPredicted RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 RPS6KA3P51812 740 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 SUZ12Q15022 739 aaKnown RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 ZBTB6Q15916 424 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 DCST1Q5T197 706 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 FAM171BQ6P995 826 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 C15orf39Q6ZRI6 1047 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 PRR23BQ6ZRT6 265 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 MCEMP1Q8IX19 187 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 CMTM7Q96FZ5 175 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 SLC35G5Q96KT7 338 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 PSKH2Q96QS6 385 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 PALMDQ9NP74 551 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 HCN3Q9P1Z3 774 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 MAP4K5Q9Y4K4 846 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 AP4B1Q9Y6B7 739 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 TEX264Q9Y6I9 313 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 LCHNA4D1U4 455 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 KLHL33A6NCF5 533 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 COCHO43405 550 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 OAS1P00973 400 aaKnown RBP13.23□□□□□ -0.29
LDB3-202ENST00000361373 RHOP08100 348 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 RCVRNP35243 200 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 CTSKP43235 329 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 STC1P52823 247 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 TMEM164Q5U3C3 297 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 SHISA4Q96DD7 197 aa13.23□□□□□ -0.29
LDB3-202ENST00000361373 TRIM43BA6NCK2 446 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 CSNK2A2P19784 350 aaPredicted RBP13.22□□□□□ -0.29
LDB3-202ENST00000361373 ALDH4A1P30038 563 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 TIFABQ6ZNK6 161 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 FAM129CQ86XR2 697 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 PQLC3Q8N755 202 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 DCBLD1Q8N8Z6 715 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 KLK6Q92876 244 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 FAM83CQ9BQN1 747 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 DCUN1D5Q9BTE7 237 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 DERL2Q9GZP9 239 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 PAIP1Q9H074 479 aaKnown RBP13.22□□□□□ -0.29
LDB3-202ENST00000361373 DOT1LQ8TEK3 1739 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 LOC100506127A0A0U1RQW1 187 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 MBLAC1A4D2B0 266 aaPredicted RBP13.22□□□□□ -0.29
LDB3-202ENST00000361373 TNFRSF11BO00300 401 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 PCDH7O60245 1069 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 GSRP00390 522 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 KCNC3Q14003 757 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 ZNF460Q14592 562 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 QPCTQ16769 361 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 TMPRSS11AQ6ZMR5 421 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 PEG10Q86TG7 708 aaKnown RBP13.22□□□□□ -0.29
LDB3-202ENST00000361373 SVOPLQ8N434 492 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 ZCCHC10Q8TBK6 192 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 CRYGNQ8WXF5 182 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 TMEM209Q96SK2 561 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 TAPBPLQ9BX59 468 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 CRISPLD1Q9H336 500 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 SPHK2Q9NRA0 654 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 SH3GLB1Q9Y371 365 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 NPC1O15118 1278 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 TMCC2O75069 709 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 SAGP10523 405 aaPredicted RBP13.22□□□□□ -0.29
LDB3-202ENST00000361373 TCF4P15884 667 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 TRIM25Q14258 630 aaKnown RBP13.22□□□□□ -0.29
LDB3-202ENST00000361373 B3GNT6Q6ZMB0 384 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 HM13Q8TCT9 377 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 EEF1AKMT1Q8WVE0 214 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 KCNJ9Q92806 393 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 CLPTM1LQ96KA5 538 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 CAMK1GQ96NX5 476 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 GPR62Q9BZJ7 368 aa13.22□□□□□ -0.29
LDB3-202ENST00000361373 SSR3Q9UNL2 185 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms