RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 TNFRSF11BO00300 401 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 SLC1A2P43004 574 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 GPD2P43304 727 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 OR7A2PQ8NGA2 310 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 RGPD8O14715 1765 aaPredicted RBP19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 POLR2CP19387 275 aaPredicted RBP19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 L1CAMP32004 1257 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 GDF10P55107 478 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 SLBPQ14493 270 aaKnown RBP eCLIP19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 MAPK14Q16539 360 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 BMT2Q1RMZ1 405 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 REP15Q6BDI9 236 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 CCDC54Q8NEL0 328 aa19.95■□□□□ 0.78
CDC42BPB-201ENST00000361246 NSG1P42857 185 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 VEGFBP49765 207 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 ZNF776Q68DI1 518 aaPredicted RBP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 ELAC1Q9H777 363 aaKnown RBP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 METTL7AQ9H8H3 244 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 A6NCN8 305 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 RIIAD1A6NNX1 92 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 NR0B1P51843 470 aaKnown RBP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 SIRPB2Q5JXA9 342 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 LY6G5CQ5SRR4 150 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 DCST1Q5T197 706 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 IL22RA1Q8N6P7 574 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 PLA2G15Q8NCC3 412 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 ZNF570Q96NI8 536 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 PCDHB3Q9Y5E6 796 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 HEXBP07686 556 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 CDH12P55289 794 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 CPSF7Q8N684 471 aaKnown RBP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 SRFBP1Q8NEF9 429 aaKnown RBP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 GIN1Q9NXP7 522 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 MROH1Q8NDA8 1641 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 EDDM13A0A1B0GTR0 161 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 ZNF726A6NNF4 738 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 PDPK1O15530 556 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 ERI3O43414 337 aaKnown RBP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 PLEKHG4BQ96PX9 1271 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 WDR77Q9BQA1 342 aaPredicted RBP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 RFPL2O75678 378 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 MSX1P28360 303 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 ODF4Q2M2E3 257 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 AMIGO3Q86WK7 504 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 CPNE8Q86YQ8 564 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 OR10A6Q8NH74 314 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 ZNF516Q92618 1163 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 C3orf18Q9UK00 162 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 INSL5Q9Y5Q6 135 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 SH3D21A4FU49 640 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 FAM149AA5PLN7 773 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 CDC40O60508 579 aaKnown RBP eCLIP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 NFKB2Q00653 900 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 CLEC12AQ5QGZ9 265 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 BRSK1Q8TDC3 778 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 RC3H2Q9HBD1 1191 aaKnown RBP19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 DHRS7Q9Y394 339 aa19.94■□□□□ 0.78
CDC42BPB-201ENST00000361246 FABP3P05413 133 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 UROSP10746 265 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 ZCCHC12Q6PEW1 402 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 AP2A2O94973 939 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 SNHG28P0DPA3 235 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 GMFBP60983 142 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 TPRG1Q6ZUI0 275 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 OR10H4Q8NGA5 316 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 MNDAP41218 407 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 MXD1Q05195 221 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 SLC10A7Q0GE19 358 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 SULT1C3Q6IMI6 304 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 FSTL4Q6MZW2 842 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 PIM3Q86V86 326 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 CPT1BQ92523 772 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 CXorf56Q9H5V9 222 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 TBX1O43435 398 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 LYPLA2O95372 231 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 CBX5P45973 191 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 PON2Q15165 354 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 WFIKKN2Q8TEU8 576 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 MOCS1Q9NZB8 636 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 ENTPD5O75356 428 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 TULP3O75386 442 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 IFNA6P05013 189 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 PTPRCAPQ14761 206 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 ABRAXAS1Q6UWZ7 409 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 HOMEZQ8IX15 550 aa19.93■□□□□ 0.78
CDC42BPB-201ENST00000361246 A0A1W2PP55 124 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 GLOD5A6NK44 160 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 DNM1LO00429 736 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 MUSKO15146 869 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 LPCAT4Q643R3 524 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 FBXL22Q6P050 247 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 SUSD3Q96L08 255 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 IFT27Q9BW83 186 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 DIABLOQ9NR28 239 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 CENPMQ9NSP4 180 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 CSN2P05814 226 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 BPGMP07738 259 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 ASMTP46597 345 aa19.92■□□□□ 0.78
CDC42BPB-201ENST00000361246 IL18Q14116 193 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms