RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 ATP6V1G3Q96LB4 118 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 TEFMQ96QE5 360 aaKnown RBP8.99□□□□□ -0.97
UPF2-202ENST00000357604 IL26Q9NPH9 171 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 SNX15Q9NRS6 342 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 PLXNA3P51805 1871 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 A0A0J9YY10 115 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 KLHL2O95198 593 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 SLC34A2O95436 690 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 HGFP14210 728 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 ABCE1P61221 599 aaKnown RBP8.99□□□□□ -0.97
UPF2-202ENST00000357604 TRIP6Q15654 476 aaKnown RBP8.99□□□□□ -0.97
UPF2-202ENST00000357604 FAM214AQ32MH5 1076 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 MED27Q6P2C8 311 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 FUBP1Q96AE4 644 aaKnown RBP8.99□□□□□ -0.97
UPF2-202ENST00000357604 TGM7Q96PF1 710 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 PITHD1Q9GZP4 211 aaPredicted RBP8.99□□□□□ -0.97
UPF2-202ENST00000357604 ANKHQ9HCJ1 492 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 RAPGEFL1Q9UHV5 662 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 PSME2Q9UL46 239 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 CDYLQ9Y232 598 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 CA5BQ9Y2D0 317 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 DHRS7Q9Y394 339 aa8.99□□□□□ -0.97
UPF2-202ENST00000357604 TET1Q8NFU7 2136 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 H7C0S8 307 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 AREL1O15033 823 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 B3GALT2O43825 422 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 CSF2P04141 144 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 TFEBP19484 476 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 HPCAL1P37235 193 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 RPS15AP62244 130 aaKnown RBP8.98□□□□□ -0.97
UPF2-202ENST00000357604 VSNL1P62760 191 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 AGBL5Q8NDL9 886 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 OR52K2Q8NGK3 314 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 IL1RAPL1Q9NZN1 696 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 SLC2A6Q9UGQ3 507 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 PRKAB1Q9Y478 270 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 CLDN4O14493 209 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 PPP2R1BP30154 601 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 BDKRB1P46663 353 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 ARHGAP19Q14CB8 494 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 RASA2Q15283 850 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 STEAP4Q687X5 459 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 CYS1Q717R9 158 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 TECPR1Q7Z6L1 1165 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 C11orf96Q7Z7L8 435 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 TEX9Q8N6V9 391 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 SLC44A1Q8WWI5 657 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 SRPK3Q9UPE1 567 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 A0A1B0GTQ1 180 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 TMEM63AO94886 807 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 PRKG2Q13237 762 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 BMPR2Q13873 1038 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 CDKN3Q16667 212 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 STPG1Q5TH74 334 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 ZFP28Q8NHY6 868 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 HNRNPLLQ8WVV9 542 aaKnown RBP8.98□□□□□ -0.97
UPF2-202ENST00000357604 MBNL1Q9NR56 388 aaKnown RBP8.98□□□□□ -0.97
UPF2-202ENST00000357604 GPRC5BQ9NZH0 403 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 VTI1BQ9UEU0 232 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 SLC13A4Q9UKG4 626 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 SLC17A4Q9Y2C5 497 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 CCL22O00626 93 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 SPAG7O75391 227 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 STK16O75716 305 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 HAUS5O94927 633 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 RPL10P27635 214 aaKnown RBP8.98□□□□□ -0.97
UPF2-202ENST00000357604 NTSP30990 170 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 TAS2R50P59544 299 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 RPS15P62841 145 aaKnown RBP8.98□□□□□ -0.97
UPF2-202ENST00000357604 RALGDSQ12967 914 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 AGERQ15109 404 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 PDK4Q16654 411 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 ZNF648Q5T619 568 aaPredicted RBP8.98□□□□□ -0.97
UPF2-202ENST00000357604 N4BP2L1Q5TBK1 243 aaPredicted RBP8.98□□□□□ -0.97
UPF2-202ENST00000357604 NAIF1Q69YI7 327 aaPredicted RBP8.98□□□□□ -0.97
UPF2-202ENST00000357604 SLC39A1Q9NY26 324 aa8.98□□□□□ -0.97
UPF2-202ENST00000357604 HRO43593 1189 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 FZD6O60353 706 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 BANF1O75531 89 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 GLRBP48167 497 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 PUM1Q14671 1186 aaKnown RBP eCLIP8.97□□□□□ -0.971e-7■■□□□ 11.8
UPF2-202ENST00000357604 PYCR3Q53H96 274 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 EFCAB11Q9BUY7 163 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 LRRN3Q9H3W5 708 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 KIR3DX1Q9H7L2 352 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 PELI2Q9HAT8 420 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 ENTPD4Q9Y227 616 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 FAM159BA6NKW6 160 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 A8MU76 341 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 TCEA3O75764 348 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 PIAS2O75928 621 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 ANP32DO95626 131 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 ENO1P06733 434 aaKnown RBP8.97□□□□□ -0.97
UPF2-202ENST00000357604 KRT4P19013 534 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 CASRP41180 1078 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 PPP2R2AP63151 447 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 MMEL1Q495T6 779 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 MANEAQ5SRI9 462 aa8.97□□□□□ -0.97
UPF2-202ENST00000357604 YOD1Q5VVQ6 348 aaPredicted RBP8.97□□□□□ -0.97
UPF2-202ENST00000357604 TLDC1Q6P9B6 456 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms