RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 CDK18Q07002 472 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 C2orf27AQ580R0 203 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 LAPTM4BQ86VI4 370 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 CDK15Q96Q40 435 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 LYARQ9NX58 379 aaKnown RBP10.39□□□□□ -0.75
FXR1-202ENST00000357559 RIC1Q4ADV7 1423 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 SPATA31A1Q5TZJ5 1347 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 GRXCR1A8MXD5 290 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 CH25HO95992 272 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 VARSP26640 1264 aaKnown RBP10.39□□□□□ -0.75
FXR1-202ENST00000357559 MAPK8P45983 427 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 TAF10Q12962 218 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 CDK10Q15131 360 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 SPATA19Q7Z5L4 167 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 BEND7Q8N7W2 519 aaPredicted RBP10.39□□□□□ -0.75
FXR1-202ENST00000357559 FAM84AQ96KN4 292 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 DGAT2Q96PD7 388 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.39□□□□□ -0.75
FXR1-202ENST00000357559 MEAF6Q9HAF1 191 aa10.39□□□□□ -0.75
FXR1-202ENST00000357559 WNT10BO00744 389 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 UNC5CO95185 931 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ITGAVP06756 1048 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 LRRC37A5PQ49AS3 106 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 MLIPQ5VWP3 458 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 MOB2Q70IA6 237 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 SNX29P2Q8IUI4 249 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 POGLUT1Q8NBL1 392 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 TBL1XR1Q9BZK7 514 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 PORCNQ9H237 461 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 SLC28A3Q9HAS3 691 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 TRPS1Q9UHF7 1281 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 MFHAS1Q9Y4C4 1052 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 CEP170Q5SW79 1584 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 CLEC3AO75596 197 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 CXCR1P25024 350 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 WNT3AP56704 352 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 SULT2A1Q06520 285 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 RNF220Q5VTB9 566 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ZYG11AQ6WRX3 759 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 TMEM145Q8NBT3 493 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 BEX2Q9BXY8 128 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 CCSER2Q9H7U1 834 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 BEX1Q9HBH7 125 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 DEC1Q9P2X7 70 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 TRAFD1O14545 582 aaPredicted RBP10.38□□□□□ -0.75
FXR1-202ENST00000357559 SPAM1P38567 509 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 PITPNAQ00169 270 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 GPAT4Q86UL3 456 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 BORCS5Q969J3 196 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ACO2Q99798 780 aaKnown RBP10.38□□□□□ -0.75
FXR1-202ENST00000357559 KCTD5Q9NXV2 234 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 GNG8Q9UK08 70 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 PCDHGA10Q9Y5H3 936 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 TECPR2O15040 1411 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 MDFIC2A0A1B0GVS7 189 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 TCRBV9S1A1TA0A576 114 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 E9PAM4 449 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 SASH3O75995 380 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ALPPL2P10696 532 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 MLLT6P55198 1093 aaPredicted RBP10.38□□□□□ -0.75
FXR1-202ENST00000357559 SP3Q02447 781 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 DSC2Q02487 901 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 CLCA4Q14CN2 919 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ATAT1Q5SQI0 421 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 GPR153Q6NV75 609 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ZNF676Q8N7Q3 588 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 TMEM161BQ8NDZ6 487 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 IPPKQ9H8X2 491 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 C14orf105Q9NVL8 296 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ABCG2Q9UNQ0 655 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 CARD8Q9Y2G2 431 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 TRPM1Q7Z4N2 1603 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 A0A0G2JPF8 293 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 A0A1W2PPL8 197 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 METTL21EPA6NDL7 271 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 HNRNPCL3B7ZW38 293 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 HDAC3O15379 428 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 RPP40O75818 363 aaKnown RBP10.38□□□□□ -0.75
FXR1-202ENST00000357559 GADD45GO95257 159 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 HNRNPCL4P0DMR1 293 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 GABRB2P47870 512 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 SLC26A5P58743 744 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 RBM48Q5RL73 367 aaKnown RBP10.38□□□□□ -0.75
FXR1-202ENST00000357559 PHTF2Q8N3S3 785 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 OR2T34Q8NGX1 318 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 OR2T3Q8NH03 318 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 RTKNQ9BST9 563 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ASPNQ9BXN1 380 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 CCNB1IP1Q9NPC3 277 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ABCD2Q9UBJ2 740 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 CLTCL1P53675 1640 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 PNPLA6Q8IY17 1366 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ALPPP05187 535 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 PSEN1P49768 467 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 GRK1Q15835 563 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 BRMS1LQ5PSV4 323 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 ZNF598Q86UK7 904 aaKnown RBP10.38□□□□□ -0.75
FXR1-202ENST00000357559 SLC35G5Q96KT7 338 aa10.38□□□□□ -0.75
FXR1-202ENST00000357559 C14orf166Q9Y224 244 aaKnown RBP10.38□□□□□ -0.75
FXR1-202ENST00000357559 MTPNP58546 118 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms