RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 GDF9O60383 454 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 PSIP1O75475 530 aaKnown RBP24.75■■□□□ 1.55
SSBP3-202ENST00000357475 TFEBP19484 476 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 HALP42357 657 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 C6orf132Q5T0Z8 1188 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 LVRNQ6Q4G3 990 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 SDR16C5Q8N3Y7 309 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 SFRP1Q8N474 314 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 EID2Q8N6I1 236 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 EMCNQ9ULC0 261 aa24.75■■□□□ 1.55
SSBP3-202ENST00000357475 ASCC3Q8N3C0 2202 aaKnown RBP24.74■■□□□ 1.55
SSBP3-202ENST00000357475 NEMP2A6NFY4 417 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 OPA1O60313 960 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 PRKG2Q13237 762 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 AGBL2Q5U5Z8 902 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 LRRC8EQ6NSJ5 796 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 OGFOD3Q6PK18 319 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 UBE2R2Q712K3 238 aaPredicted RBP24.74■■□□□ 1.55
SSBP3-202ENST00000357475 CCDC91Q7Z6B0 441 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 ATP6V1G3Q96LB4 118 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 FERD3LQ96RJ6 166 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 SMC6Q96SB8 1091 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 NMRAL1Q9HBL8 299 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 NLGN3Q9NZ94 848 aa24.74■■□□□ 1.55
SSBP3-202ENST00000357475 SPEGQ15772 3267 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 COPEO14579 308 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 ATP8B1O43520 1251 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 C1orf105O95561 183 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 COL6A2P12110 1019 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 ATP6V0D1P61421 351 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 UBE2IP63279 158 aaKnown RBP24.73■■□□□ 1.55
SSBP3-202ENST00000357475 PPP1R3AQ16821 1122 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 FAM83EQ2M2I3 478 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 MBOAT1Q6ZNC8 495 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 SLC35F3Q8IY50 421 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 GPR156Q8NFN8 814 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 OR4C6Q8NH72 309 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 JPH3Q8WXH2 748 aaPredicted RBP24.73■■□□□ 1.55
SSBP3-202ENST00000357475 KIAA1191Q96A73 305 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 APOPT1Q96IL0 206 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 HGH1Q9BTY7 390 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 UTP6Q9NYH9 597 aaKnown RBP24.73■■□□□ 1.55
SSBP3-202ENST00000357475 CPNE7Q9UBL6 633 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 PLAGL1Q9UM63 463 aa24.73■■□□□ 1.55
SSBP3-202ENST00000357475 SIGLEC6O43699 453 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 TYROBPO43914 113 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 SBK3P0C264 359 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 ZNF883P0CG24 379 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 TPBGLP0DKB5 382 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 CRHR1P34998 444 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 AASDHQ4L235 1098 aaPredicted RBP24.72■■□□□ 1.55
SSBP3-202ENST00000357475 TECRLQ5HYJ1 363 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 N4BP2L1Q5TBK1 243 aaPredicted RBP24.72■■□□□ 1.55
SSBP3-202ENST00000357475 UNC5DQ6UXZ4 953 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 C17orf82Q86X59 251 aaPredicted RBP24.72■■□□□ 1.55
SSBP3-202ENST00000357475 ZNF761Q86XN6 746 aaPredicted RBP24.72■■□□□ 1.55
SSBP3-202ENST00000357475 CNPY4Q8N129 248 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 ARL14Q8N4G2 192 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 TMEM151AQ8N4L1 468 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 LMNTD1Q8N9Z9 388 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 ACBD3Q9H3P7 528 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 XPR1Q9UBH6 696 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 PDE10AQ9Y233 779 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 GOLGA4Q13439 2230 aaKnown RBP24.72■■□□□ 1.55
SSBP3-202ENST00000357475 ZNF292O60281 2723 aa24.72■■□□□ 1.55
SSBP3-202ENST00000357475 TK2O00142 265 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 XRCC1P18887 633 aaPredicted RBP24.71■■□□□ 1.55
SSBP3-202ENST00000357475 MPP2Q14168 576 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 GRB7Q14451 532 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 ACAP2Q15057 778 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 OR5K2Q8NHB8 316 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 MAPK15Q8TD08 544 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 EXT2Q93063 718 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 CXorf40BQ96DE9 158 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 SCYL1Q96KG9 808 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 FOPNLQ96NB1 174 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 SLC12A9Q9BXP2 914 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 STMN4Q9H169 189 aaPredicted RBP24.71■■□□□ 1.55
SSBP3-202ENST00000357475 TFB2MQ9H5Q4 396 aaKnown RBP24.71■■□□□ 1.55
SSBP3-202ENST00000357475 TMEM9BQ9NQ34 198 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 MKS1Q9NXB0 559 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 SENP1Q9P0U3 644 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 SLC17A7Q9P2U7 560 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 DCDC2Q9UHG0 476 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 TDRKHQ9Y2W6 561 aaKnown RBP24.71■■□□□ 1.55
SSBP3-202ENST00000357475 LY6G6EA0A0G2JKS1 128 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 KIR2DS5A0A0G2JLQ3 304 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 A0A0G2JNG1 304 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 C4orf47A7E2U8 309 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 H3BQF6 201 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 KIR2DS3K7RE56 304 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 GLRA3O75311 464 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 C8GP07360 202 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 KIR2DS5Q14953 304 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 DBX2Q6ZNG2 339 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 GOLGA6L1Q8N7Z2 621 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 ATOH8Q96SQ7 321 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 CPSF2Q9P2I0 782 aaKnown RBP24.71■■□□□ 1.55
SSBP3-202ENST00000357475 ACTL7BQ9Y614 415 aa24.71■■□□□ 1.55
SSBP3-202ENST00000357475 U3KQA8 63 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms