RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TMEM26Q6ZUK4 368 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 CD163Q86VB7 1156 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 IGDCC3Q8IVU1 814 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 SFTPA2Q8IWL1 248 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 DCBLD1Q8N8Z6 715 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 NOA1Q8NC60 698 aaKnown RBP3.88□□□□□ -1.79
CNOT4-202ENST00000356162 FBXO36Q8NEA4 188 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 OR10G6Q8NH81 332 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 ZNF417Q8TAU3 575 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 LKAAEAR1Q8TD35 194 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 ZFPM2Q8WW38 1151 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 ELMO1Q92556 727 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 TMEM159Q96B96 161 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 TMEM74Q96NL1 305 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 GFM1Q96RP9 751 aaKnown RBP3.88□□□□□ -1.79
CNOT4-202ENST00000356162 ZNF587Q96SQ5 575 aaPredicted RBP3.88□□□□□ -1.79
CNOT4-202ENST00000356162 SLC38A3Q99624 504 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 TRIM56Q9BRZ2 755 aaKnown RBP3.88□□□□□ -1.79
CNOT4-202ENST00000356162 LRRC1Q9BTT6 524 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 GSX2Q9BZM3 304 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 MVB12BQ9H7P6 319 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 SYNDIG1Q9H7V2 258 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 PLAC1Q9HBJ0 212 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 SAYSD1Q9NPB0 183 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 IARS2Q9NSE4 1012 aaKnown RBP3.88□□□□□ -1.79
CNOT4-202ENST00000356162 KCNK4Q9NYG8 393 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 MTRF1LQ9UGC7 380 aaKnown RBP3.88□□□□□ -1.79
CNOT4-202ENST00000356162 FBXO5Q9UKT4 447 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 ANGPTL2Q9UKU9 493 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 ZMIZ1Q9ULJ6 1067 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 ADAMTS20P59510 1910 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 CEP250Q9BV73 2442 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 ZNF292O60281 2723 aa3.88□□□□□ -1.79
CNOT4-202ENST00000356162 MN1Q10571 1320 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 IGHV1OR21-1A0A087WYE8 117 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 C1QTNF9BB2RNN3 333 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 EIF3FO00303 357 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PPM1DO15297 605 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CSO75390 466 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 RPN2P04844 631 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 APOA4P06727 396 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PKMP14618 531 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 AOAHP28039 575 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 STX2P32856 288 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 LEPRP48357 1165 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PLTPP55058 493 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 MPP1Q00013 466 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 GUCY2DQ02846 1103 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 MGAT5Q09328 741 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 TRA2AQ13595 282 aaKnown RBP eCLIP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CUL1Q13616 776 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 BOP1Q14137 746 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 GBX1Q14549 363 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CLCA4Q14CN2 919 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 FASTKD3Q14CZ7 662 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 UNC5DQ6UXZ4 953 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CCNI2Q6ZMN8 369 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 LDB1Q86U70 411 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 SLC26A11Q86WA9 606 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CFAP206Q8IYR0 622 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ZBED8Q8IZ13 594 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 SLC22A15Q8IZD6 547 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CHCHD4Q8N4Q1 142 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CLDN19Q8N6F1 224 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 FBXO25Q8TCJ0 367 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 KCNJ9Q92806 393 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 NXPE2Q96DL1 559 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 LIN37Q96GY3 246 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 C12orf66Q96MD2 445 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PWWP2AQ96N64 755 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 AARSD1Q9BTE6 412 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 TSPYL1Q9H0U9 437 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CCDC68Q9H2F9 335 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 KIR3DX1Q9H7L2 352 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 FBXO6Q9NRD1 293 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 LATS2Q9NRM7 1088 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ZDHHC18Q9NUE0 388 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ZNF624Q9P2J8 865 aaPredicted RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 KLK13Q9UKR3 277 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CLCA2Q9UQC9 943 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 WDR37Q9Y2I8 494 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 MSRB2Q9Y3D2 182 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CCDC187A0A096LP49 1063 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 A0A1W2PQM1 296 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ESYT3A0FGR9 886 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 TMEM8BA6NDV4 472 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 OR52A4PA6NMU1 304 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 GOLGA8KD6RF30 607 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 GOLGA8TH3BQL2 631 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 KDM1AO60341 852 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 GPC4O75487 556 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CPNE6O95741 557 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 PROS1P07225 676 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 MPC1LP0DKB6 136 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ERVK-10P10266 1014 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 ITGB6P18564 788 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CD9P21926 228 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 RPL10P27635 214 aaKnown RBP3.87□□□□□ -1.79
CNOT4-202ENST00000356162 FMO4P31512 558 aa3.87□□□□□ -1.79
CNOT4-202ENST00000356162 CCR7P32248 378 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms