RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 HRO43593 1189 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 NOBOXO60393 691 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 SCO1O75880 301 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 RHOBTB1O94844 696 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 MT-ND1P03886 318 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 PRKCBP05771 671 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 CD19P15391 556 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 NPR3P17342 541 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 KRT20P35900 424 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 PTGER2P43116 358 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 MAGEA2P43356 314 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 HOXA1P49639 335 aaPredicted RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 TPMTP51580 245 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 SLC12A2P55011 1212 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 POLR2GP62487 172 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCR9-201ENST00000355983 FLI1Q01543 452 aaPredicted RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 PICALMQ13492 652 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 ZNF273Q14593 569 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 PAFAH1B3Q15102 231 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 RPS6KA2Q15349 733 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 GLYR1Q49A26 553 aaPredicted RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 KLHL12Q53G59 568 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 LAIR1Q6GTX8 287 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 TMEM81Q6P7N7 255 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 SPESP1Q6UW49 350 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 HHIPL2Q6UWX4 724 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 FAM183BPQ6ZVS7 135 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 METTL3Q86U44 580 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 FAM124AQ86V42 546 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 IFNEQ86WN2 208 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 CHPFQ8IZ52 775 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 STX19Q8N4C7 294 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 NAT16Q8N8M0 369 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 RHBDF1Q96CC6 855 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 RNF31Q96EP0 1072 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 CDCA5Q96FF9 252 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 RADILQ96JH8 1075 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 ACTR8Q9H981 624 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 IFT46Q9NQC8 304 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 CUEDC1Q9NWM3 386 aaPredicted RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 GPATCH2LQ9NWQ4 482 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 ERVK13-1Q9NX77 482 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 KIF17Q9P2E2 1029 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 PSORS1C1Q9UIG5 152 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 AGO1Q9UL18 857 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 MFHAS1Q9Y4C4 1052 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 TNPO3Q9Y5L0 923 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 ANK1P16157 1881 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 MICAL3Q7RTP6 2002 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 IQCMA0A1B0GVH7 501 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 RPS10-NUDT3A0A1W2PQS6 291 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 ZNF98A6NK75 572 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 POLRMTO00411 1230 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 KHNYNO15037 678 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 AKR7A2O43488 359 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 DPM1O60762 260 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 SLC43A1O75387 559 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 ERN1O75460 977 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 FGF18O76093 207 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 TGM6O95932 706 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 LGI1O95970 557 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 C1RP00736 705 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 IFNA7P01567 189 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 TNNC2P02585 160 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 TRIM23P36406 574 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 NRIP1P48552 1158 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 HERVK_113P63132 956 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 YBX1P67809 324 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 CYP4F2P78329 520 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 UBE3AQ05086 875 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 CYP4F3Q08477 520 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 IRF3Q14653 427 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 TSC22D1Q15714 1073 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 PAGE3Q5JUK9 113 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 LCLAT1Q6UWP7 414 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 ZNF367Q7RTV3 350 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 SNX20Q7Z614 316 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 DDX53Q86TM3 631 aaKnown RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 COMMD7Q86VX2 200 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 NT5DC4Q86YG4 428 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 RASAL3Q86YV0 1011 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 CEP97Q8IW35 865 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 C2CD4AQ8NCU7 369 aaPredicted RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 OR52H1Q8NGJ2 320 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 PTERQ96BW5 349 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 KLHL15Q96M94 604 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 COL21A1Q96P44 957 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 KCTD15Q96SI1 283 aaPredicted RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 ERVK-6Q9BXR3 956 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 SHARPINQ9H0F6 387 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 LDAHQ9H6V9 325 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 RANBP3Q9H6Z4 567 aaPredicted RBP7.55□□□□□ -1.2
CCR9-201ENST00000355983 TCEAL9Q9UHQ7 104 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 PKP3Q9Y446 797 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 HSPB11Q9Y547 144 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 GMPPBQ9Y5P6 360 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 DNAJC15Q9Y5T4 150 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 LTBP1Q14766 1721 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 A0A1W2PQ09 198 aa7.55□□□□□ -1.2
CCR9-201ENST00000355983 GNGT2O14610 69 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms