RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 KRT6CP48668 564 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 RPIAP49247 311 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 PTSQ03393 145 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 ARHGEF7Q14155 803 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 RALGPS2Q86X27 583 aaPredicted RBP21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 HS6ST3Q8IZP7 471 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 TCAIMQ8N3R3 496 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 LEMD2Q8NC56 503 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 CEP44Q9C0F1 390 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 SLC32A1Q9H598 525 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 ZNF639Q9UID6 485 aa21.81■■□□□ 1.08
NKX2-1-201ENST00000354822 MANBAO00462 879 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 PLOD2O00469 737 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 FFAR3O14843 346 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 GRM6O15303 877 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 GPR42O15529 346 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 RSL1D1O76021 490 aaKnown RBP21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 POP4O95707 220 aaKnown RBP21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 ALDH3B2P48448 385 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 RBBP5Q15291 538 aaKnown RBP21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 MAPKAPK3Q16644 382 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 DNAJB8Q8NHS0 232 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 BPIFB1Q8TDL5 484 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 CCDC115Q96NT0 180 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 SEC22BO75396 215 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 BMP10O95393 424 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 TIMP1P01033 207 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 ANXA6P08133 673 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 C22orf39Q6P5X5 142 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 TTC33Q6PID6 262 aaPredicted RBP21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 RIMKLAQ8IXN7 391 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 ADGRG2Q8IZP9 1017 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 RNF145Q96MT1 663 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 SEPHS2Q99611 448 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 EMILIN2Q9BXX0 1053 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 PIF1Q9H611 641 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 GORASP2Q9H8Y8 452 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 C1orf109Q9NX04 203 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 SMPD3Q9NY59 655 aaPredicted RBP21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 SLC25A13Q9UJS0 675 aa21.8■■□□□ 1.08
NKX2-1-201ENST00000354822 IGLV3-16A0A075B6K0 115 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 A0A087WXM4 84 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 C8GP07360 202 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 CSF2RAP15509 400 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 GGT1P19440 569 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 RPS9P46781 194 aaKnown RBP21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 MTPNP58546 118 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 FAM98BQ52LJ0 330 aaKnown RBP21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 RGL4Q8IZJ4 473 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 FAM9CQ8IZT9 166 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 DHRSXQ8N5I4 330 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 GTF2H4Q92759 462 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 VOPP1Q96AW1 172 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 ARL15Q9NXU5 204 aa21.79■■□□□ 1.08
NKX2-1-201ENST00000354822 RAP2AP10114 183 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CTSAP10619 480 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CTSOP43234 321 aaPredicted RBP21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 STK19P49842 368 aaPredicted RBP21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 POLR2LP62875 67 aaKnown RBP21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 LRRC26Q2I0M4 334 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 ATP13A5Q4VNC0 1218 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CARD16Q5EG05 197 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 FKBP9P1Q75LS8 142 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CMTM8Q8IZV2 173 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 DTWD1Q8N5C7 304 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 ZNF784Q8NCA9 323 aaPredicted RBP21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 ITFG1Q8TB96 612 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 MPP4Q96JB8 637 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 ZNF583Q96ND8 569 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 SLC12A9Q9BXP2 914 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CLMPQ9H6B4 373 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 USP22Q9UPT9 525 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 A0A1W2PRU2 124 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 EI24O14681 340 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CLOCKO15516 846 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 DEAF1O75398 565 aaPredicted RBP21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 BMP1P13497 986 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 ITGB8P26012 769 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 HLA-FP30511 346 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CCR7P32248 378 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CA8P35219 290 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 SELPLGQ14242 412 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 PTGR1Q14914 329 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 LRRC70Q7Z2Q7 622 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 LIX1Q8N485 282 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 UGT2B28Q9BY64 529 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 ZBP1Q9H171 429 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 PARVBQ9HBI1 364 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 FARSBQ9NSD9 589 aaKnown RBP21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 CEPT1Q9Y6K0 416 aa21.78■■□□□ 1.08
NKX2-1-201ENST00000354822 DENND4CQ5VZ89 1909 aa21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 PGRP06401 933 aa21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 HIST1H2AGP0C0S8 130 aaPredicted RBP21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 HIST1H2ADP20671 130 aa21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 AOAHP28039 575 aa21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 SOX11P35716 441 aa21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 CAPGP40121 348 aa21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 HNMTP50135 292 aa21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 HMGCS1Q01581 520 aa21.77■■□□□ 1.08
NKX2-1-201ENST00000354822 CHRNB3Q05901 458 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms