RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MAPRE3Q9UPY8 281 aa13.45□□□□□ -0.26
SMC6-201ENST00000351948 IL6P05231 212 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 PTDSS1P48651 473 aaKnown RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 HKDC1Q2TB90 917 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 CNTD1Q8N815 330 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 LMX1AQ8TE12 382 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 LRMDAQ9H2I8 198 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 NLE1Q9NVX2 485 aaPredicted RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 IGLON5A6NGN9 336 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 SUV39H1O43463 412 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 TSPAN6O43657 245 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 KERAO60938 352 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 FOSL2P15408 326 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 PGDP52209 483 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 HYAL2Q12891 473 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 MTX3Q5HYI7 312 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 GLYATQ6IB77 296 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 ALKAL1Q6UXT8 129 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 FBXO15Q8NCQ5 510 aaPredicted RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 PMEPA1Q969W9 287 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 RMND5BQ96G75 393 aaPredicted RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 GPR174Q9BXC1 333 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 TDRD1Q9BXT4 1180 aaKnown RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 ZNF334Q9HCZ1 680 aaPredicted RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 GPN3Q9UHW5 284 aaPredicted RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 F5P12259 2224 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 LATO43561 262 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 NPHS1O60500 1241 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 MTPNP58546 118 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 PRAMEF14Q5SWL7 426 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 PRAMEF13Q5VWM6 474 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 FAM20CQ8IXL6 584 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 NMD3Q96D46 503 aaKnown RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 SMIM14Q96QK8 99 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 LZTS1Q9Y250 596 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 N4BP2Q86UW6 1770 aaPredicted RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 LOC730098B7Z3J9 87 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 PAICSP22234 425 aaKnown RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 FEN1P39748 380 aaKnown RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 GJA8P48165 433 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 SLC13A2Q13183 592 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 REP15Q6BDI9 236 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 PDE12Q6L8Q7 609 aaKnown RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 TRNP1Q6NT89 227 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 MBOAT1Q6ZNC8 495 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 Q8N9G6 341 aaPredicted RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 OR10A6Q8NH74 314 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 DLG3Q92796 817 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 FGF13Q92913 245 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 EXO5Q9H790 373 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 FETUBQ9UGM5 382 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 ABCA3Q99758 1704 aa13.44□□□□□ -0.26
SMC6-201ENST00000351948 MARF1Q9Y4F3 1742 aaKnown RBP13.44□□□□□ -0.26
SMC6-201ENST00000351948 A0A1W2PQU0 124 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 TP73O15350 636 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 ANPEPP15144 967 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 OR52J3Q8NH60 311 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 VPS35Q96QK1 796 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 ZNF184Q99676 751 aaPredicted RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 CCDC28BQ9BUN5 200 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 PRRG3Q9BZD7 231 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 EPOP01588 193 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 CCNYL3P0C7X3 344 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 SOX9P48436 509 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 RPS14P62263 151 aaKnown RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 LIPEQ05469 1076 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 ELAVL3Q14576 367 aaKnown RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 PCBP2Q15366 365 aaKnown RBP eCLIP13.43□□□□□ -0.26
SMC6-201ENST00000351948 ACSBG2Q5FVE4 666 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 UBAP2Q5T6F2 1119 aaKnown RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 AP1ARQ63HQ0 302 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 FAM13CQ8NE31 585 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 BPIFB6Q8NFQ5 453 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 LPGAT1Q92604 370 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 RBM18Q96H35 190 aaKnown RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 DGCR6LQ9BY27 220 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 MYO18AQ92614 2054 aaKnown RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 MID1O15344 667 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 HLA-DQA2P01906 255 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 ASMTP46597 345 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 ARMC8Q8IUR7 673 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 CYP4Z2PQ8N1L4 340 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 C2CD4AQ8NCU7 369 aaPredicted RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 SYT11Q9BT88 431 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 SEC14L3Q9UDX4 400 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 WASH3PC4AMC7 463 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 SERPINB7O75635 380 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 MATN4O95460 622 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 SEPHS1P49903 392 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 RAB8AP61006 207 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 ZNF155Q12901 538 aaPredicted RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 LPCAT4Q643R3 524 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 SLC8B1Q6J4K2 584 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 YTHDF3Q7Z739 585 aaKnown RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 SRFBP1Q8NEF9 429 aaKnown RBP13.43□□□□□ -0.26
SMC6-201ENST00000351948 OR4F6Q8NGB9 312 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 FAM110BQ8TC76 370 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 SLC39A3Q9BRY0 314 aa13.43□□□□□ -0.26
SMC6-201ENST00000351948 FNDC11Q9BVV2 318 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms