RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 KLHL42Q9P2K6 505 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 PSMD11O00231 422 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 LINGO3P0C6S8 592 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 FAM58BPP0C7Q3 252 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ZNF37AP17032 561 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 FDXRP22570 491 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ITPKAP23677 461 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 TBC1D21Q8IYX1 336 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 HM13Q8TCT9 377 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 PROX1Q92786 737 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 GLMNQ92990 594 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 USP7Q93009 1102 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 SNX8Q9Y5X2 465 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 FAM220BPB1ANY3 271 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 EBLN1P0CF75 366 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ANPEPP15144 967 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 AOC1P19801 751 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 GALNT1Q10472 559 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 RFX4Q33E94 735 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 CDKL4Q5MAI5 379 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ERN2Q76MJ5 926 aaKnown RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 TAS1R1Q7RTX1 841 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 TMPRSS11BQ86T26 416 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 KBTBD6Q86V97 674 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ZDHHC13Q8IUH4 622 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 SAMD14Q8IZD0 417 aaPredicted RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 RNF145Q96MT1 663 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 SLC17A6Q9P2U8 582 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 TBX21Q9UL17 535 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 PSMD13Q9UNM6 376 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 V9GYQ6 96 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 IGLV3-10A0A075B6K4 115 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 A0A1B0GVG6 124 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ATP6AP2A0A1C7CYW4 349 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 C2orf71A6NGG8 1288 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 FAM25AB3EWG3 89 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 FAM25CB3EWG5 89 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 FAM25GB3EWG6 89 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 KMOO15229 486 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 KCNJ13O60928 360 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ATP6AP2O75787 350 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 HNF1BP35680 557 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 IL23RQ5VWK5 629 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 METTL2BQ6P1Q9 378 aaKnown RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 FRMD7Q6ZUT3 714 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 C1orf50Q9BV19 199 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 SEMA3GQ9NS98 782 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 IMP3Q9NV31 184 aaKnown RBP11.94□□□□□ -0.5
SMAD9-201ENST00000350148 PSAT1Q9Y617 370 aa11.94□□□□□ -0.5
SMAD9-201ENST00000350148 ALDOAP04075 364 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 ACRV1P26436 265 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 TECRLQ5HYJ1 363 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 ZC3H12BQ5HYM0 836 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 GPRC6AQ5T6X5 926 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 FAM13CQ8NE31 585 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 PANX1Q96RD7 426 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 CDH22Q9UJ99 828 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 LOC285095A0A1B0GVY8 99 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 VEGFDO43915 354 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 VIPP01282 170 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 UGT1A6P19224 532 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 UGT1A1P22309 533 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 UGT1A4P22310 534 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 UGT1A3P35503 534 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 UGT1A5P35504 534 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 TRAP1Q12931 704 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 TOP3AQ13472 1001 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 REP15Q6BDI9 236 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 CCSAPQ6IQ19 270 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 CNTN4Q8IWV2 1026 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 RGL4Q8IZJ4 473 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 TEX26Q8N6G2 289 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 LENG8Q96PV6 779 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 APOL4Q9BPW4 351 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 OR2AG1Q9H205 316 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 AKAP7Q9P0M2 348 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 MRPS33Q9Y291 106 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 KCTD3Q9Y597 815 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 HEPACAM2A8MVW5 462 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 SLC7A2P52569 658 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 TRAF2Q12933 501 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 DEPDC1Q5TB30 811 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 C1orf53Q5VUE5 145 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 GK5Q6ZS86 529 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 SIPA1Q96FS4 1042 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 ZFRQ96KR1 1074 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 SAMD4AQ9UPU9 718 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 TTC24A2A3L6 582 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 TNFAIP8O95379 198 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 OAS1P00973 400 aaKnown RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 FGF3P11487 239 aaPredicted RBP11.93□□□□□ -0.5
SMAD9-201ENST00000350148 ATP6V1C1P21283 382 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 WASP42768 502 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 ATP13A5Q4VNC0 1218 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 ADCY4Q8NFM4 1077 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 WDR90Q96KV7 1748 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 IDH3BO43837 385 aa11.93□□□□□ -0.5
SMAD9-201ENST00000350148 NPPAP01160 153 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms