RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 FOXK2Q01167 660 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 NDUFA5Q16718 116 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 JMJD6Q6NYC1 403 aaPredicted RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 Q6ZN92 141 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 RBM44Q6ZP01 1051 aaKnown RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 DPY19L3Q6ZPD9 716 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 SATL1Q86VE3 508 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 MFSD6LQ8IWD5 586 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 PRELID2Q8N945 189 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 SPERTQ8NA61 448 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 BPIFCQ8NFQ6 507 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 DAZAP1Q96EP5 407 aaKnown RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 WDR89Q96FK6 387 aaPredicted RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 TXNDC15Q96J42 360 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 C1QTNF2Q9BXJ5 285 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 MRPL1Q9BYD6 325 aaKnown RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 KLC2Q9H0B6 622 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ZNF700Q9H0M5 742 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ING2Q9H160 280 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 NRIP3Q9NQ35 241 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 STK39Q9UEW8 545 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 Q9UFV3 132 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 PKP3Q9Y446 797 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 PXDNQ92626 1479 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TOPAZ1Q8N9V7 1692 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 C15orf62A8K5M9 175 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 MAGEB3O15480 346 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TOX4O94842 621 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 AP2A2O94973 939 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 PRLP01236 227 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 CFIP05156 583 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TSHRP16473 764 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 SMPD1P17405 629 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 HADHBP55084 474 aaKnown RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 ZNF280AP59817 542 aaPredicted RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 TCP10Q12799 353 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ART3Q13508 389 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 SLC9B1Q4ZJI4 515 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 PDCD4Q53EL6 469 aaKnown RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 FAM46CQ5VWP2 391 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 SPRYD7Q5W111 196 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 LRRC8EQ6NSJ5 796 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 LRRC8BQ6P9F7 803 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 RNF144BQ7Z419 303 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ERASQ7Z444 233 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 BCL9LQ86UU0 1499 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 OR4A16Q8NH70 328 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 FAM20AQ96MK3 541 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TIMP4Q99727 224 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TMEM47Q9BQJ4 181 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 CIPCQ9C0C6 399 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TINAGL1Q9GZM7 467 aaPredicted RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 UPF3AQ9H1J1 476 aaKnown RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 TMEM165Q9HC07 324 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 LMCD1Q9NZU5 365 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TBC1D14Q9P2M4 693 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ANAPC2Q9UJX6 822 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 RAB23Q9ULC3 237 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ING4Q9UNL4 249 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 NIP7Q9Y221 180 aaKnown RBP eCLIP5.87□□□□□ -1.47
RFC1-201ENST00000349703 UBE2J1Q9Y385 318 aaPredicted RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 ROBO3Q96MS0 1386 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 NPEPPSL1A6NEC2 478 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 DCLK1O15075 740 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TMPRSS11DO60235 418 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 NOL4O94818 638 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 AKR1A1P14550 325 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 PSMC3P17980 439 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 LAG3P18627 525 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 CD40LGP29965 261 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 BMP8BP34820 402 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 RAG2P55895 527 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 HUNKP57058 714 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 HPCAP84074 193 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TNP2Q05952 138 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ECSCRQ19T08 205 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 LRRC36Q1X8D7 754 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 SHEQ5VZ18 495 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ZDHHC24Q6UX98 284 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 TRABD2AQ86V40 505 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 MRPL41Q8IXM3 137 aaKnown RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 CELF5Q8N6W0 485 aaKnown RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 SEMA4DQ92854 862 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 OLFM1Q99784 485 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 CMKLR1Q99788 373 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 SAV1Q9H4B6 383 aaPredicted RBP5.87□□□□□ -1.47
RFC1-201ENST00000349703 TRIM39Q9HCM9 518 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 XPNPEP3Q9NQH7 507 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ATAD3AQ9NVI7 634 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 GRHL1Q9NZI5 618 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 NCKIPSDQ9NZQ3 722 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 ACAD8Q9UKU7 415 aa5.87□□□□□ -1.47
RFC1-201ENST00000349703 KIF1AQ12756 1690 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 C1orf226A1L170 272 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 C7orf72A4D263 438 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 NMT2O60551 498 aa5.86□□□□□ -1.47
RFC1-201ENST00000349703 RSL1D1O76021 490 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 UBA1P22314 1058 aaKnown RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 TRHRP34981 398 aaPredicted RBP5.86□□□□□ -1.47
RFC1-201ENST00000349703 SERPINB9P50453 376 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms