RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 SPATC1Q76KD6 591 aa17.49■□□□□ 0.39
APP-202ENST00000348990 CYP2U1Q7Z449 544 aa17.49■□□□□ 0.39
APP-202ENST00000348990 LRRTM3Q86VH5 581 aa17.49■□□□□ 0.39
APP-202ENST00000348990 PGBD5Q8N414 524 aa17.49■□□□□ 0.39
APP-202ENST00000348990 LIX1Q8N485 282 aa17.49■□□□□ 0.39
APP-202ENST00000348990 TTC29Q8NA56 475 aaPredicted RBP17.49■□□□□ 0.39
APP-202ENST00000348990 DYNC2LI1Q8TCX1 351 aa17.49■□□□□ 0.39
APP-202ENST00000348990 SCUBE2Q9NQ36 999 aa17.49■□□□□ 0.39
APP-202ENST00000348990 TRMT13Q9NUP7 481 aaKnown RBP17.49■□□□□ 0.39
APP-202ENST00000348990 SNX8Q9Y5X2 465 aa17.49■□□□□ 0.39
APP-202ENST00000348990 TLR5O60602 858 aa17.49■□□□□ 0.39
APP-202ENST00000348990 ACOX1Q15067 660 aa17.49■□□□□ 0.39
APP-202ENST00000348990 ZNF404Q494X3 552 aa17.49■□□□□ 0.39
APP-202ENST00000348990 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
APP-202ENST00000348990 LRRC49Q8IUZ0 686 aa17.49■□□□□ 0.39
APP-202ENST00000348990 ATL1Q8WXF7 558 aa17.49■□□□□ 0.39
APP-202ENST00000348990 SLX1AQ9BQ83 275 aa17.49■□□□□ 0.39
APP-202ENST00000348990 PDZK1P1A8MUH7 402 aa17.49■□□□□ 0.39
APP-202ENST00000348990 A8MV72 311 aaPredicted RBP17.49■□□□□ 0.39
APP-202ENST00000348990 TTC34A8MYJ7 566 aa17.49■□□□□ 0.39
APP-202ENST00000348990 WISP3O95389 354 aaPredicted RBP17.49■□□□□ 0.39
APP-202ENST00000348990 FGF1P05230 155 aa17.49■□□□□ 0.39
APP-202ENST00000348990 RFX4Q33E94 735 aa17.49■□□□□ 0.39
APP-202ENST00000348990 LIMS2Q7Z4I7 341 aa17.49■□□□□ 0.39
APP-202ENST00000348990 KLHDC8BQ8IXV7 354 aa17.49■□□□□ 0.39
APP-202ENST00000348990 CFAP52Q8N1V2 620 aa17.49■□□□□ 0.39
APP-202ENST00000348990 DPP10Q8N608 796 aa17.49■□□□□ 0.39
APP-202ENST00000348990 ZNF548Q8NEK5 533 aaPredicted RBP17.49■□□□□ 0.39
APP-202ENST00000348990 SH3GL1Q99961 368 aa17.49■□□□□ 0.39
APP-202ENST00000348990 TRIT1Q9H3H1 467 aaKnown RBP17.49■□□□□ 0.39
APP-202ENST00000348990 KLHL3Q9UH77 587 aa17.49■□□□□ 0.39
APP-202ENST00000348990 VPS4AQ9UN37 437 aa17.49■□□□□ 0.39
APP-202ENST00000348990 PKP3Q9Y446 797 aa17.49■□□□□ 0.39
APP-202ENST00000348990 GOLGA8CPA6NN73 597 aa17.48■□□□□ 0.39
APP-202ENST00000348990 UPK1BO75841 260 aa17.48■□□□□ 0.39
APP-202ENST00000348990 PRSS23O95084 383 aa17.48■□□□□ 0.39
APP-202ENST00000348990 SCELO95171 688 aa17.48■□□□□ 0.39
APP-202ENST00000348990 LRATO95237 230 aa17.48■□□□□ 0.39
APP-202ENST00000348990 PRR35P0CG20 571 aa17.48■□□□□ 0.39
APP-202ENST00000348990 PKMP14618 531 aaKnown RBP17.48■□□□□ 0.39
APP-202ENST00000348990 MASP1P48740 699 aa17.48■□□□□ 0.39
APP-202ENST00000348990 HK3P52790 923 aa17.48■□□□□ 0.39
APP-202ENST00000348990 DAB2P98082 770 aa17.48■□□□□ 0.39
APP-202ENST00000348990 CACHD1Q5VU97 1274 aa17.48■□□□□ 0.39
APP-202ENST00000348990 OVOS1Q6IE37 1185 aa17.48■□□□□ 0.39
APP-202ENST00000348990 CYP4Z1Q86W10 505 aa17.48■□□□□ 0.39
APP-202ENST00000348990 LPCAT1Q8NF37 534 aa17.48■□□□□ 0.39
APP-202ENST00000348990 GPRC5AQ8NFJ5 357 aa17.48■□□□□ 0.39
APP-202ENST00000348990 CEP19Q96LK0 163 aa17.48■□□□□ 0.39
APP-202ENST00000348990 CEP44Q9C0F1 390 aa17.48■□□□□ 0.39
APP-202ENST00000348990 IFT52Q9Y366 437 aa17.48■□□□□ 0.39
APP-202ENST00000348990 GPR39O43194 453 aa17.48■□□□□ 0.39
APP-202ENST00000348990 HLA-DPA1P20036 260 aa17.48■□□□□ 0.39
APP-202ENST00000348990 GRK3P35626 688 aa17.48■□□□□ 0.39
APP-202ENST00000348990 LYSMD2Q8IV50 215 aa17.48■□□□□ 0.39
APP-202ENST00000348990 ARRDC2Q8TBH0 407 aa17.48■□□□□ 0.39
APP-202ENST00000348990 ISG20Q96AZ6 181 aaKnown RBP17.48■□□□□ 0.39
APP-202ENST00000348990 ZNF486Q96H40 463 aaPredicted RBP17.48■□□□□ 0.39
APP-202ENST00000348990 DMRTB1Q96MA1 342 aa17.48■□□□□ 0.39
APP-202ENST00000348990 SERPINB11Q96P15 392 aa17.48■□□□□ 0.39
APP-202ENST00000348990 RUBCNLQ9H714 662 aa17.48■□□□□ 0.39
APP-202ENST00000348990 FBXO8Q9NRD0 319 aa17.48■□□□□ 0.39
APP-202ENST00000348990 FBXO10Q9UK96 956 aa17.48■□□□□ 0.39
APP-202ENST00000348990 SAMHD1Q9Y3Z3 626 aaKnown RBP17.48■□□□□ 0.39
APP-202ENST00000348990 SMIM35A0A1B0GVV1 85 aa17.48■□□□□ 0.39
APP-202ENST00000348990 ILVBLA1L0T0 632 aa17.48■□□□□ 0.39
APP-202ENST00000348990 PER2O15055 1255 aa17.48■□□□□ 0.39
APP-202ENST00000348990 NUAK1O60285 661 aa17.48■□□□□ 0.39
APP-202ENST00000348990 MGEA5O60502 916 aa17.48■□□□□ 0.39
APP-202ENST00000348990 DNAJB5O75953 348 aa17.48■□□□□ 0.39
APP-202ENST00000348990 SNAI1O95863 264 aaPredicted RBP17.48■□□□□ 0.39
APP-202ENST00000348990 PGRP06401 933 aa17.48■□□□□ 0.39
APP-202ENST00000348990 SPNP16150 400 aa17.48■□□□□ 0.39
APP-202ENST00000348990 EPHA2P29317 976 aa17.48■□□□□ 0.39
APP-202ENST00000348990 HNRNPFP52597 415 aaKnown RBP17.48■□□□□ 0.39
APP-202ENST00000348990 NDUFA5Q16718 116 aa17.48■□□□□ 0.39
APP-202ENST00000348990 DDR2Q16832 855 aa17.48■□□□□ 0.39
APP-202ENST00000348990 CCBE1Q6UXH8 406 aaPredicted RBP17.48■□□□□ 0.39
APP-202ENST00000348990 OR8H2Q8N162 312 aa17.48■□□□□ 0.39
APP-202ENST00000348990 OR8J3Q8NGG0 315 aa17.48■□□□□ 0.39
APP-202ENST00000348990 ACTL8Q9H568 366 aa17.48■□□□□ 0.39
APP-202ENST00000348990 KRT84Q9NSB2 600 aa17.48■□□□□ 0.39
APP-202ENST00000348990 FARSBQ9NSD9 589 aaKnown RBP17.48■□□□□ 0.39
APP-202ENST00000348990 DNTTP04053 509 aa17.47■□□□□ 0.39
APP-202ENST00000348990 DUSP28Q4G0W2 176 aa17.47■□□□□ 0.39
APP-202ENST00000348990 SLC10A4Q96EP9 437 aa17.47■□□□□ 0.39
APP-202ENST00000348990 BTN2A3PQ96KV6 586 aa17.47■□□□□ 0.39
APP-202ENST00000348990 GORASP2Q9H8Y8 452 aa17.47■□□□□ 0.39
APP-202ENST00000348990 PARVBQ9HBI1 364 aa17.47■□□□□ 0.39
APP-202ENST00000348990 MOXD2PA6NHM9 499 aa17.47■□□□□ 0.39
APP-202ENST00000348990 C2orf81A6NN90 581 aa17.47■□□□□ 0.39
APP-202ENST00000348990 MUSKO15146 869 aa17.47■□□□□ 0.39
APP-202ENST00000348990 PEX11BO96011 259 aa17.47■□□□□ 0.39
APP-202ENST00000348990 OGNP20774 298 aaKnown RBP17.47■□□□□ 0.39
APP-202ENST00000348990 ARPP19P56211 112 aa17.47■□□□□ 0.39
APP-202ENST00000348990 HUNKP57058 714 aa17.47■□□□□ 0.39
APP-202ENST00000348990 GTF2H2Q13888 395 aa17.47■□□□□ 0.39
APP-202ENST00000348990 TPRG1LQ5T0D9 272 aa17.47■□□□□ 0.39
APP-202ENST00000348990 GTF2H2CQ6P1K8 395 aa17.47■□□□□ 0.39
APP-202ENST00000348990 SLC22A15Q8IZD6 547 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms