RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 PIGGQ5H8A4 983 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 ATAT1Q5SQI0 421 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 PARM1Q6UWI2 310 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 EFL1Q7Z2Z2 1120 aaKnown RBP16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 AMIGO2Q86SJ2 522 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 ANKRD46Q86W74 232 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 CXorf40AQ8TE69 158 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 EBPLQ9BY08 206 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 HPS4Q9NQG7 708 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 RNASEH2AO75792 299 aaKnown RBP16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 PDGFRLQ15198 375 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 DUSP6Q16828 381 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 VITQ6UXI7 678 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 VOPP1Q96AW1 172 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 SAMD11Q96NU1 681 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 ZSCAN5AQ9BUG6 496 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 SLC6A17Q9H1V8 727 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 PTBP2Q9UKA9 531 aaKnown RBP16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 REV3LO60673 3130 aa16.79■□□□□ 0.28
SMARCC2-202ENST00000347471 TRIM38O00635 465 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 LATO43561 262 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 FTH1P02794 183 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 ASLP04424 464 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 ZCCHC18P0CG32 403 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 AOAHP28039 575 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 ADSLP30566 484 aaPredicted RBP16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 POLR2JP52435 117 aaKnown RBP16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 TRAF3Q13114 568 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 CHIT1Q13231 466 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 PAGE3Q5JUK9 113 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 CES5AQ6NT32 575 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 BTN2A2Q8WVV5 523 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 FGF14Q92915 247 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 APOLD1Q96LR9 279 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 OSBPL6Q9BZF3 934 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 ATG13O75143 517 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 GSNP06396 782 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 PCNAP12004 261 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 GTF2H3Q13889 308 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 XKR6Q5GH73 641 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 PHYKPLQ8IUZ5 450 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 WFIKKN2Q8TEU8 576 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 NUS1Q96E22 293 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 FOPNLQ96NB1 174 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 TBCDQ9BTW9 1192 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 INTS7Q9NVH2 962 aaKnown RBP16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 PLAGL1Q9UM63 463 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 KANSL1LA0AUZ9 987 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 H3BM21 787 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 MTHFD1P11586 935 aaKnown RBP16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 IGFBP4P22692 258 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 RPL10P27635 214 aaKnown RBP16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 MMP12P39900 470 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 ERVK-8P63133 956 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 CNTN1Q12860 1018 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 ELAVL3Q14576 367 aaKnown RBP16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 HERC3Q15034 1050 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 KRTCAP2Q8N6L1 136 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 MYADMQ96S97 322 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 USP22Q9UPT9 525 aa16.78■□□□□ 0.28
SMARCC2-202ENST00000347471 CLDN9O95484 217 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 ADRB3P13945 408 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 MTPNP58546 118 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 PGS1Q32NB8 556 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 CYP20A1Q6UW02 462 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 SPPL2CQ8IUH8 684 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 RGL4Q8IZJ4 473 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 GPR156Q8NFN8 814 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 JADE3Q92613 823 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 ZBTB18Q99592 522 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 ZNF184Q99676 751 aaPredicted RBP16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 DPY30Q9C005 99 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 LTBP2Q14767 1821 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 EDDM13A0A1B0GTR0 161 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 MID1O15344 667 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 KRT6AP02538 564 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 KRT6BP04259 564 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 KRT6CP48668 564 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 DLX2Q07687 328 aaPredicted RBP16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 LRP8Q14114 963 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 C9orf64Q5T6V5 341 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 SUSD1Q6UWL2 747 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 LIX1Q8N485 282 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 THUMPD3Q9BV44 507 aaKnown RBP16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 MARK1Q9P0L2 795 aa16.77■□□□□ 0.28
SMARCC2-202ENST00000347471 NUP214P35658 2090 aaPredicted RBP16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 PAK4O96013 591 aaPredicted RBP16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 PCBP2Q15366 365 aaKnown RBP eCLIP16.77■□□□□ 0.278e-8■■■□□ 15.4
SMARCC2-202ENST00000347471 NRF1Q16656 503 aa16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 CPA6Q8N4T0 437 aa16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 ZNF513Q8N8E2 541 aaPredicted RBP16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 PDPRQ8NCN5 879 aa16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 GID8Q9NWU2 228 aa16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 BCAP29Q9UHQ4 241 aa16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 EIF3LQ9Y262 564 aaKnown RBP16.77■□□□□ 0.27
SMARCC2-202ENST00000347471 A0A1W2PP55 124 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 FAM149AA5PLN7 773 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 RGS14O43566 566 aa16.76■□□□□ 0.27
SMARCC2-202ENST00000347471 FAM174BQ3ZCQ3 159 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms