RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 PPM1JQ5JR12 505 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 SPOCK2Q92563 424 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 SHDQ96IW2 340 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 PHF12Q96QT6 1004 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 ST6GALNAC4Q9H4F1 302 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 B3GAT2Q9NPZ5 323 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 SLC7A4O43246 635 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 MPIP34949 423 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 VLDLRP98155 873 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 CHRDL2Q6WN34 429 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 COQ8BQ96D53 544 aa22.73■■□□□ 1.23
NPAS3-201ENST00000346562 ZNF726A6NNF4 738 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 SCAMP1O15126 338 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 FSHRP23945 695 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 DHPSP49366 369 aaPredicted RBP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 PLA2G16P53816 162 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 PITPNAQ00169 270 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 E2F2Q14209 437 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 PUM1Q14671 1186 aaKnown RBP eCLIP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 PRR23BQ6ZRT6 265 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 GTPBP3Q969Y2 492 aaKnown RBP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 UNC93B1Q9H1C4 597 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 FAM172BPA6NC97 362 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 TFECO14948 347 aaPredicted RBP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 MT-CYBP00156 380 aaPredicted RBP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 RPS9P46781 194 aaKnown RBP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 DGKEP52429 567 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 SYVN1Q86TM6 617 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 OR10H4Q8NGA5 316 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 LPGAT1Q92604 370 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 KAT2AQ92830 837 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 UFD1Q92890 307 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 FAXDC2Q96IV6 333 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 TAS2R7Q9NYW3 318 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 RIPK3Q9Y572 518 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 KLRG2A4D1S0 409 aaPredicted RBP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 DUXAA6NLW8 204 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 GSC2O15499 205 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 DPY19L1Q2PZI1 675 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 KLHL22Q53GT1 634 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 KCTD8Q6ZWB6 473 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 RAB43Q86YS6 212 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 CPNE9Q8IYJ1 553 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 RPL10LQ96L21 214 aaKnown RBP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 TPK1Q9H3S4 243 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 SAGE2PA6NJ88 616 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 H0YGN5 161 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 CXCR6O00574 342 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 WNT9AO14904 365 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 IRAK2O43187 625 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 SEMA3DO95025 777 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 SLC5A9Q2M3M2 681 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 LPCAT4Q643R3 524 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 SMARCD3Q6STE5 483 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 ENPP7Q6UWV6 458 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 CEP295NLQ96MC4 621 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 CIB1Q99828 191 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 TLR6Q9Y2C9 796 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 TESMINQ9Y4I5 508 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 GPR25O00155 361 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 PIP5K1BO14986 540 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 RPL17P18621 184 aaKnown RBP22.72■■□□□ 1.23
NPAS3-201ENST00000346562 PYROXD2Q8N2H3 581 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 TNFAIP8L1Q8WVP5 186 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 ERVK-5Q9HDB9 667 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 MEMO1Q9Y316 297 aa22.72■■□□□ 1.23
NPAS3-201ENST00000346562 RPS14P62263 151 aaKnown RBP22.71■■□□□ 1.23
NPAS3-201ENST00000346562 PDGFRLQ15198 375 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 PMM1Q92871 262 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 DHRS1Q96LJ7 313 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 DGAT2Q96PD7 388 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 PSKH2Q96QS6 385 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 LRRC32Q14392 662 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 ARL13AQ5H913 290 aaPredicted RBP22.71■■□□□ 1.23
NPAS3-201ENST00000346562 AHSA2Q719I0 299 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 FAM84AQ96KN4 292 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 ZSWIM3Q96MP5 696 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 R3HDM2Q9Y2K5 976 aaKnown RBP22.71■■□□□ 1.23
NPAS3-201ENST00000346562 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 SLC7A1P30825 629 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 SH3RF2Q8TEC5 729 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 C8orf48Q96LL4 319 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 SSU72Q9NP77 194 aaKnown RBP22.71■■□□□ 1.23
NPAS3-201ENST00000346562 NOX1Q9Y5S8 564 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 AGR2O95994 175 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 ARCN1P48444 511 aaKnown RBP22.71■■□□□ 1.23
NPAS3-201ENST00000346562 NUDT13Q86X67 352 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 DNAJA4Q8WW22 397 aaPredicted RBP22.71■■□□□ 1.23
NPAS3-201ENST00000346562 TBL1XR1Q9BZK7 514 aa22.71■■□□□ 1.23
NPAS3-201ENST00000346562 NATD1Q8N6N6 113 aa22.7■■□□□ 1.23
NPAS3-201ENST00000346562 HMGB4Q8WW32 186 aa22.7■■□□□ 1.23
NPAS3-201ENST00000346562 KLK6Q92876 244 aa22.7■■□□□ 1.23
NPAS3-201ENST00000346562 CENPNQ96H22 339 aaPredicted RBP22.7■■□□□ 1.23
NPAS3-201ENST00000346562 CCDC59Q9P031 241 aaKnown RBP22.7■■□□□ 1.23
NPAS3-201ENST00000346562 CLCA3PQ9Y6N3 262 aa22.7■■□□□ 1.23
NPAS3-201ENST00000346562 SPATA31D1Q6ZQQ2 1576 aa22.7■■□□□ 1.23
NPAS3-201ENST00000346562 WTIPA6NIX2 430 aaPredicted RBP22.7■■□□□ 1.22
NPAS3-201ENST00000346562 B4DGG1 531 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms