RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 CPN2P22792 545 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 RBMS1P29558 406 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 OR6Y1Q8NGX8 325 aa16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 RUVBL1Q9Y265 456 aaKnown RBP16.1■□□□□ 0.17
SMARCA4-201ENST00000344626 CBX6O95503 412 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 ZNF24P17028 368 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 GJA4P35212 333 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 PLA2G16P53816 162 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 MAPK15Q8TD08 544 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 SNX7Q9UNH6 387 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 COPG1Q9Y678 874 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 PAPPA2Q9BXP8 1791 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 KHNYNO15037 678 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 PLIN3O60664 434 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 KRT8P05787 483 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 TAF13Q15543 124 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 OTUD3Q5T2D3 398 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 PM20D1Q6GTS8 502 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 ARHGAP36Q6ZRI8 547 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 FSTL5Q8N475 847 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 ZNF563Q8TA94 476 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 HOPXQ9BPY8 73 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 TIMM22Q9Y584 194 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 TRIM38O00635 465 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 EDF1O60869 148 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 NIPSNAP2O75323 286 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 MAOBP27338 520 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 ARCN1P48444 511 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 PRR5P85299 388 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 ERICH5Q6P6B1 374 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 LRRC70Q7Z2Q7 622 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 VN1R5Q7Z5H4 357 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 GPR149Q86SP6 731 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 DHDDSQ86SQ9 333 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 WDTC1Q8N5D0 677 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 EXOSC8Q96B26 276 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 FNDC11Q9BVV2 318 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 TBC1D17Q9HA65 648 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 ZNF334Q9HCZ1 680 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 GRHL1Q9NZI5 618 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 FTSJ1Q9UET6 329 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 GPR34Q9UPC5 381 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 CACNA1SQ13698 1873 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 KLHL33A6NCF5 533 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 FAM72CH0Y354 149 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 APOA1P02647 267 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 ETV3P41162 512 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 EPS8Q12929 822 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 ADRM1Q16186 407 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 FAM72AQ5TYM5 149 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 PRPF38BQ5VTL8 546 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 FAM72DQ6L9T8 149 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 FAM72BQ86X60 149 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 MFSD6LQ8IWD5 586 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 IQCKQ8N0W5 287 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 NXPE3Q969Y0 559 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 THAP11Q96EK4 314 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 C7orf26Q96N11 449 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 HCN3Q9P1Z3 774 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 MATN4O95460 622 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 CORO7P57737 925 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 SLC13A2Q13183 592 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 SP140Q13342 867 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 NR1D2Q14995 579 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 MLF2Q15773 248 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 EIF3MQ7L2H7 374 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 PROSER1Q86XN7 944 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 RIT1Q92963 219 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 TOE1Q96GM8 510 aaKnown RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 JSRP1Q96MG2 331 aaPredicted RBP16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 NDC1Q9BTX1 674 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 EPS8L2Q9H6S3 715 aa16.09■□□□□ 0.17
SMARCA4-201ENST00000344626 OR5K4A6NMS3 321 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 WASH3PC4AMC7 463 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 PDE5AO76074 875 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 TCF3P15923 654 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 GPRC6AQ5T6X5 926 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 PAQR3Q6TCH7 311 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 MBOAT1Q6ZNC8 495 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 TRAM1L1Q8N609 369 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 CNPPD1Q9BV87 410 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 MARCH5Q9NX47 278 aa16.08■□□□□ 0.17
SMARCA4-201ENST00000344626 A0A0J9YYE9 177 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 OR4F21O95013 312 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 CAPN1P07384 714 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 POLR2JP52435 117 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 CYP4F3Q08477 520 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 ZNF234Q14588 700 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 OASLQ15646 514 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 FBXO15Q8NCQ5 510 aaPredicted RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 TRMT2BQ96GJ1 504 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 OR2M4Q96R27 311 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 VIRMAQ69YN4 1812 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 FAM189BP81408 668 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 SLC9A5Q14940 896 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 LARS2Q15031 903 aaKnown RBP16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 TIGD2Q4W5G0 525 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 IL23RQ5VWK5 629 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 KIAA1161Q6NSJ0 714 aa16.08■□□□□ 0.16
SMARCA4-201ENST00000344626 SUN3Q8TAQ9 357 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms