RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 OGNP20774 298 aaKnown RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 AGXTP21549 392 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 RPS3AP61247 264 aaKnown RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 RPS7P62081 194 aaKnown RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 TP53BP2Q13625 1128 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ACOX1Q15067 660 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 NCF4Q15080 339 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 MOGQ16653 247 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ZNF773Q6PK81 442 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 GOLGA7Q7Z5G4 137 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 TMEM102Q8N9M5 508 aaPredicted RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ZUFSPQ96AP4 578 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 COG8Q96MW5 612 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 TSGA13Q96PP4 275 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 LCHNA4D1U4 455 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 FAM25AB3EWG3 89 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 FAM25CB3EWG5 89 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 FAM25GB3EWG6 89 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 MYL12BO14950 172 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 POLR2IP36954 125 aaKnown RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 COPZ1P61923 177 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ADAM17P78536 824 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 NFATC3Q12968 1075 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 SLC13A2Q13183 592 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ZNF57Q68EA5 555 aaPredicted RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 DENND5AQ6IQ26 1287 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 TMEM126BQ8IUX1 230 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ZBTB2Q8N680 514 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 C19orf18Q8NEA5 215 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 TFAP2CQ92754 450 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ITFG2Q969R8 447 aa12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ARIH1Q9Y4X5 557 aaPredicted RBP12.2□□□□□ -0.46
SNRNP48-201ENST00000342415 ANKRD66B4E2M5 251 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CREG1O75629 220 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 INMTO95050 263 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 PENKP01210 267 aaPredicted RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ESR1P03372 595 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 NKX2-5P52952 324 aaPredicted RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 EPHB3P54753 998 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CYP4F8P98187 520 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SREBF2Q12772 1141 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CNTN1Q12860 1018 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 GANABQ14697 944 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 USP39Q53GS9 565 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 C6orf141Q5SZD1 244 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 PTCHD4Q6ZW05 846 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ZBTB8BQ8NAP8 495 aaPredicted RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 C7orf57Q8NEG2 295 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 WDR36Q8NI36 951 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ENKURQ8TC29 256 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 IL4I1Q96RQ9 567 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 TEX12Q9BXU0 123 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ANKRD60Q9BZ19 345 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CRISPLD1Q9H336 500 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ATP13A3Q9H7F0 1226 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 TNFRSF12AQ9NP84 129 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 OLAHQ9NV23 265 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 GIN1Q9NXP7 522 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SCN9AQ15858 1988 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 PIPSLA2A3N6 862 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 TNFRSF11BO00300 401 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ZNF195O14628 629 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ACOT8O14734 319 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ABCB7O75027 752 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SERPINI2O75830 405 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SCELO95171 688 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CLDN7O95471 211 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 TNNI3P19429 210 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 PTGER3P43115 390 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 DEF8Q6ZN54 512 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 EIF3MQ7L2H7 374 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SLC22A15Q8IZD6 547 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 BRD9Q9H8M2 597 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 SACM1LQ9NTJ5 587 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 GPC6Q9Y625 555 aaPredicted RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 TMX2-CTNND1H3BSU7 103 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 UGT2B11O75310 529 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 RASAL1O95294 804 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 NFKB2Q00653 900 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ABRAXAS2Q15018 415 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 TAF1AQ15573 450 aaPredicted RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 C11orf91Q3C1V1 193 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 PABPC1LQ4VXU2 614 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 RFTN2Q52LD8 501 aaPredicted RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CPTPQ5TA50 214 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 TMPRSS11BQ86T26 416 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 CHERPQ8IWX8 916 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ANKFN1Q8N957 763 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 MYDGFQ969H8 173 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 FUNDC2Q9BWH2 189 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 NUSAP1Q9BXS6 441 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 PRRG3Q9BZD7 231 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 LHPPQ9H008 270 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 MAGEH1Q9H213 219 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 KAT8Q9H7Z6 458 aaKnown RBP12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 AASDHPPTQ9NRN7 309 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 NUDT4Q9NZJ9 180 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 ERVK-18Q9QC07 812 aa12.19□□□□□ -0.46
SNRNP48-201ENST00000342415 PTBP2Q9UKA9 531 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms