RNA–Protein interactions for RNA: ENST00000340473.7

GTF2F2-201, Transcript of general transcription factor IIF subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F2, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F2-201ENST00000340473 LIPMQ5VYY2 423 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 CAPRIN2Q6IMN6 1127 aaKnown RBP13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 FBXO39Q8N4B4 442 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 PTGR2Q8N8N7 351 aaPredicted RBP13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 GPBAR1Q8TDU6 330 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 PIGKQ92643 395 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 ZNF75CPQ92670 426 aaPredicted RBP13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 INSM2Q96T92 566 aaPredicted RBP13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 CCDC134Q9H6E4 229 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 MANSC1Q9H8J5 431 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 RDH14Q9HBH5 336 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 NCKIPSDQ9NZQ3 722 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 SCHIP1Q9P0W5 487 aaPredicted RBP13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 APOBEC3BQ9UH17 382 aaKnown RBP13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 CIDEBQ9UHD4 219 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 TP53BP1Q12888 1972 aaPredicted RBP13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 VPS13AQ96RL7 3174 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 DMDP11532 3685 aa13.02□□□□□ -0.33
GTF2F2-201ENST00000340473 PDZK1P1A8MUH7 402 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 C1orf105O95561 183 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 CSF2P04141 144 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 NME1P15531 152 aaKnown RBP13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 GNSP15586 552 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 CYP2A7P20853 494 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 BLKP51451 505 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 ILF3Q12906 894 aaKnown RBP eCLIP13.01□□□□□ -0.337e-10■■■■□ 25.3
GTF2F2-201ENST00000340473 C18orf21Q32NC0 220 aaPredicted RBP13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 UAP1L1Q3KQV9 507 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 DUS1LQ6P1R4 473 aaKnown RBP13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 PDPRQ8NCN5 879 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 PHC3Q8NDX5 983 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 OR6Y1Q8NGX8 325 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 TFGQ92734 400 aaPredicted RBP13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 TMEM237Q96Q45 408 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 LRRC61Q9BV99 259 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 FANCMQ8IYD8 2048 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 LRRC14BA6NHZ5 514 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 IFRD1O00458 451 aaPredicted RBP13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 SIX3O95343 332 aaPredicted RBP13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 CATP04040 527 aaKnown RBP13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 CTSEP14091 401 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 LSP1P33241 339 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 MAPK9P45984 424 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 AGTR2P50052 363 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 DNAJB13P59910 316 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 BNC1Q01954 994 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 C1orf61Q13536 156 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 TEAD4Q15561 434 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 PRRT3Q5FWE3 981 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 UNC5DQ6UXZ4 953 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 PRR23BQ6ZRT6 265 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 SLC22A9Q8IVM8 553 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 OR5AR1Q8NGP9 310 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 MCOLN3Q8TDD5 553 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 ESAMQ96AP7 390 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 GATA5Q9BWX5 397 aaPredicted RBP13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 ARL15Q9NXU5 204 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 ASF1AQ9Y294 204 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 ASB1Q9Y576 335 aa13.01□□□□□ -0.33
GTF2F2-201ENST00000340473 TDRD6O60522 2096 aaKnown RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 A6NCN8 305 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 OR52A4PA6NMU1 304 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 PRR5-ARHGAP8B1AHC4 643 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 TCP11X1B4DZS4 312 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 HIST1H2AGP0C0S8 130 aaPredicted RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 HIST1H2ADP20671 130 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 MAP4P27816 1152 aaKnown RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 ARRB2P32121 409 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 NAGLUP54802 743 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 ALDH18A1P54886 795 aaKnown RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 BST1Q10588 318 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 LPAL2Q16609 132 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 KIF19Q2TAC6 998 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 PEAR1Q5VY43 1037 aaPredicted RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 RGS9BPQ6ZS82 235 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 RPS27LQ71UM5 84 aaKnown RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 SYT12Q8IV01 421 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 PPP1R14CQ8TAE6 165 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 SKA1Q96BD8 255 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 RHBDF1Q96CC6 855 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 CCDC126Q96EE4 140 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 HIST1H2AHQ96KK5 128 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 C12orf66Q96MD2 445 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 HIST1H2AJQ99878 128 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 EGFL8Q99944 293 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 H2AFJQ9BTM1 129 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 C20orf27Q9GZN8 174 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 ZNF395Q9H8N7 513 aaPredicted RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 SUSD2Q9UGT4 822 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 PCOLCE2Q9UKZ9 415 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 LAMA1P25391 3075 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 ZNF318Q5VUA4 2279 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 KLF11O14901 512 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 TAPBPO15533 448 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 SHOX2O60902 331 aaPredicted RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 S100BP04271 92 aaPredicted RBP13□□□□□ -0.33
GTF2F2-201ENST00000340473 SERPINE1P05121 402 aa13□□□□□ -0.33
GTF2F2-201ENST00000340473 IMPDH1P20839 514 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms