RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 DLGAP3O95886 979 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 APOA4P06727 396 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 EBLN1P0CF75 366 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 LIFP15018 202 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 ZNF28P17035 718 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 PAMP19021 973 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 RPS3P23396 243 aaKnown RBP eCLIP14.18□□□□□ -0.14
ERCC1-203ENST00000340192 MAP4P27816 1152 aaKnown RBP14.18□□□□□ -0.14
ERCC1-203ENST00000340192 MAGEA3P43357 314 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 EIF3BP55884 814 aaKnown RBP14.18□□□□□ -0.14
ERCC1-203ENST00000340192 TYSND1Q2T9J0 566 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 CYB5D1Q6P9G0 228 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 FBXO38Q6PIJ6 1188 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 PCSK4Q6UW60 755 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 SDCCAG8Q86SQ7 713 aaPredicted RBP14.18□□□□□ -0.14
ERCC1-203ENST00000340192 LRRC6Q86X45 466 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 PPP1R3BQ86XI6 285 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 CREG2Q8IUH2 290 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 PPIL6Q8IXY8 311 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 CARFQ8N187 725 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 D2HGDHQ8N465 521 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 ZSCAN1Q8NBB4 408 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 OR5K2Q8NHB8 316 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 SLCO2A1Q92959 643 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 NAPGQ99747 312 aaPredicted RBP14.18□□□□□ -0.14
ERCC1-203ENST00000340192 PDE7BQ9NP56 450 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 IL1RAPL1Q9NZN1 696 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 PCYOX1Q9UHG3 505 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 POLG2Q9UHN1 485 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 ICKQ9UPZ9 632 aa14.18□□□□□ -0.14
ERCC1-203ENST00000340192 TDRKHQ9Y2W6 561 aaKnown RBP14.18□□□□□ -0.14
ERCC1-203ENST00000340192 MAGEB16A2A368 324 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 CTAGE9A4FU28 777 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 C2orf74A8MZ97 194 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 SPAG6O75602 509 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 KIAA0754O94854 1291 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 TPBGLP0DKB5 382 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 CDH3P22223 829 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 PRDX3P30048 256 aaKnown RBP14.17□□□□□ -0.14
ERCC1-203ENST00000340192 ACY1Q03154 408 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 PTK6Q13882 451 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 DHX34Q14147 1143 aaKnown RBP14.17□□□□□ -0.14
ERCC1-203ENST00000340192 TMED2Q15363 201 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.17□□□□□ -0.14
ERCC1-203ENST00000340192 ANKRD20A4Q4UJ75 823 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 CTSL3PQ5NE16 218 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 RNF187Q5TA31 235 aaPredicted RBP14.17□□□□□ -0.14
ERCC1-203ENST00000340192 RNASEH2BQ5TBB1 312 aaKnown RBP14.17□□□□□ -0.14
ERCC1-203ENST00000340192 NEPROQ6NW34 567 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 ADGRF3Q8IZF5 1079 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 UNC5BQ8IZJ1 945 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 AGGF1Q8N302 714 aaeCLIP14.17□□□□□ -0.14
ERCC1-203ENST00000340192 LPGAT1Q92604 370 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 TTC9Q92623 222 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 ZNF669Q96BR6 464 aaPredicted RBP14.17□□□□□ -0.14
ERCC1-203ENST00000340192 BIRC8Q96P09 236 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 PANX3Q96QZ0 392 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 TCF12Q99081 682 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 C1GALT1Q9NS00 363 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 FGF21Q9NSA1 209 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 SOHLH2Q9NX45 425 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 ASIC3Q9UHC3 531 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 RARRES3Q9UL19 164 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 SAR1BQ9Y6B6 198 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 RPS6KL1Q9Y6S9 549 aa14.17□□□□□ -0.14
ERCC1-203ENST00000340192 LOC101059948A0A1B0GTJ6 334 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 ZCWPW2A0A1B0GU75 182 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 SLC9B1P1A6NJY1 282 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 PFDN6O15212 129 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 FANCGO15287 622 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 SLCO2B1O94956 709 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 TIAF1O95411 115 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 OGNP20774 298 aaKnown RBP14.16□□□□□ -0.14
ERCC1-203ENST00000340192 FMO4P31512 558 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 SHMT2P34897 504 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 STAT5AP42229 794 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 PTGIRP43119 386 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 TUBB4BP68371 445 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 CYP4F2P78329 520 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 ABHD18Q0P651 414 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 ABRQ12979 859 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 TUBB2AQ13885 445 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 MAP7Q14244 749 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 GPR19Q15760 415 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 TAF1BQ53T94 588 aaPredicted RBP14.16□□□□□ -0.14
ERCC1-203ENST00000340192 DNAJC21Q5F1R6 531 aaKnown RBP14.16□□□□□ -0.14
ERCC1-203ENST00000340192 TMTC4Q5T4D3 741 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 PWWP2BQ6NUJ5 590 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 C6orf15Q6UXA7 325 aaPredicted RBP14.16□□□□□ -0.14
ERCC1-203ENST00000340192 UNC5AQ6ZN44 842 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 TMEM135Q86UB9 458 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 CILP2Q8IUL8 1156 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 KLHL7Q8IXQ5 586 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 ESX1Q8N693 406 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 GALNT6Q8NCL4 622 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 CFAP61Q8NHU2 1237 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 SLC39A7Q92504 469 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 KIAA1143Q96AT1 154 aaPredicted RBP14.16□□□□□ -0.14
ERCC1-203ENST00000340192 SIGLEC10Q96LC7 697 aa14.16□□□□□ -0.14
ERCC1-203ENST00000340192 TUBB2BQ9BVA1 445 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms