RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 CFAP61Q8NHU2 1237 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 ZCCHC14Q8WYQ9 949 aaKnown RBP14.83□□□□□ -0.03
UBE3B-201ENST00000340074 C9orf72Q96LT7 481 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 PHACTR1Q9C0D0 580 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 TRIT1Q9H3H1 467 aaKnown RBP14.83□□□□□ -0.03
UBE3B-201ENST00000340074 LATS2Q9NRM7 1088 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 ZDHHC18Q9NUE0 388 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 HRASLS2Q9NWW9 162 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 MOCS1Q9NZB8 636 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 DKK4Q9UBT3 224 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 TSR3Q9UJK0 312 aaKnown RBP14.83□□□□□ -0.03
UBE3B-201ENST00000340074 TDRKHQ9Y2W6 561 aaKnown RBP14.83□□□□□ -0.03
UBE3B-201ENST00000340074 MED16Q9Y2X0 877 aa14.83□□□□□ -0.03
UBE3B-201ENST00000340074 CFAP47Q6ZTR5 3102 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 ZZEF1O43149 2961 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 OR6C74A6NCV1 312 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 OR5K3A6NET4 321 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 HGSO14964 777 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-201ENST00000340074 TNFSF15O95150 251 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 JMJD7P0C870 316 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 ITIH1P19827 911 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 ABCG1P45844 678 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 CLCN7P51798 805 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 MGAT5Q09328 741 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 GBX1Q14549 363 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 GLE1Q53GS7 698 aaKnown RBP14.83□□□□□ -0.04
UBE3B-201ENST00000340074 FAM92BQ6ZTR7 304 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 GALNT7Q86SF2 657 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 OOSP2Q86WS3 158 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 SPNS2Q8IVW8 549 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 LSMEM2Q8N112 164 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 SIDT2Q8NBJ9 832 aaKnown RBP14.83□□□□□ -0.04
UBE3B-201ENST00000340074 SKA2Q8WVK7 121 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-201ENST00000340074 LCN9Q8WX39 176 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 KCNJ9Q92806 393 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 SLC46A1Q96NT5 459 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 NDNQ99608 321 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 SLC30A3Q99726 388 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 AARSD1Q9BTE6 412 aaKnown RBP14.83□□□□□ -0.04
UBE3B-201ENST00000340074 RAB33BQ9H082 229 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 SRMSQ9H3Y6 488 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 TFB2MQ9H5Q4 396 aaKnown RBP14.83□□□□□ -0.04
UBE3B-201ENST00000340074 AKAP7Q9P0M2 348 aaPredicted RBP14.83□□□□□ -0.04
UBE3B-201ENST00000340074 ZFATQ9P243 1243 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 EPHA6Q9UF33 1036 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 PISDQ9UG56 409 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 COMMD10Q9Y6G5 202 aa14.83□□□□□ -0.04
UBE3B-201ENST00000340074 APC2O95996 2303 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 LAMA5O15230 3695 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 KIF1CO43896 1103 aaKnown RBP14.82□□□□□ -0.04
UBE3B-201ENST00000340074 DXOO77932 396 aaKnown RBP14.82□□□□□ -0.04
UBE3B-201ENST00000340074 POLR2CP19387 275 aaPredicted RBP14.82□□□□□ -0.04
UBE3B-201ENST00000340074 RBMS1P29558 406 aaKnown RBP14.82□□□□□ -0.04
UBE3B-201ENST00000340074 CSTF2P33240 577 aaKnown RBP eCLIP14.82□□□□□ -0.04
UBE3B-201ENST00000340074 ETV5P41161 510 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 MAGEA4P43358 317 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 ACSBG2Q5FVE4 666 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 IGF2-ASQ6U949 168 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 AGBL5Q8NDL9 886 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 GIMAP7Q8NHV1 300 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 ZDHHC12Q96GR4 267 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 GPR21Q99679 349 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 XKR8Q9H6D3 395 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 ASCL3Q9NQ33 180 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 FAM114A2Q9NRY5 505 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 POLG2Q9UHN1 485 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 PLAGL1Q9UM63 463 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 ICKQ9UPZ9 632 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 RUVBL2Q9Y230 463 aaKnown RBP14.82□□□□□ -0.04
UBE3B-201ENST00000340074 NFS1Q9Y697 457 aa14.82□□□□□ -0.04
UBE3B-201ENST00000340074 TAF4O00268 1085 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 BTN3A1O00481 513 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 RASSF9O75901 435 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 PIAS1O75925 651 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 RPN2P04844 631 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 ITGA2BP08514 1039 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 TPBGLP0DKB5 382 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 FGF3P11487 239 aaPredicted RBP14.81□□□□□ -0.04
UBE3B-201ENST00000340074 CCL4P13236 92 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 ATP5DP30049 168 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 MAPK10P53779 464 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 TIAL1Q01085 375 aaKnown RBP eCLIP14.81□□□□□ -0.04
UBE3B-201ENST00000340074 CUL1Q13616 776 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 KLHL38Q2WGJ6 581 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 TBC1D25Q3MII6 688 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 RBM20Q5T481 1227 aaKnown RBP14.81□□□□□ -0.04
UBE3B-201ENST00000340074 CACHD1Q5VU97 1274 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 ARMC6Q6NXE6 501 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 UNC5DQ6UXZ4 953 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 C3orf62Q6ZUJ4 267 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 AMIGO1Q86WK6 493 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 PROSER1Q86XN7 944 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 FAM129CQ86XR2 697 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 CD200R1Q8TD46 325 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 IFT81Q8WYA0 676 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 OCIAD1Q9NX40 245 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 CIDEBQ9UHD4 219 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 DHRS7Q9Y394 339 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 PSAT1Q9Y617 370 aa14.81□□□□□ -0.04
UBE3B-201ENST00000340074 SDK2Q58EX2 2172 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms