RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 RRASP10301 218 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 FCGR1AP12314 374 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC6A2P23975 617 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 C21orf33P30042 268 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 CLK2P49760 499 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 YWHAHQ04917 246 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 ARMCX4Q5H9R4 360 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 RTP2Q5QGT7 225 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 TTC23Q5W5X9 447 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 C8orf82Q6P1X6 216 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 C16orf86Q6ZW13 317 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 TMEM179BQ7Z7N9 219 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 ADGRG3Q86Y34 549 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 VWA5B2Q8N398 1253 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 ANKRD52Q8NB46 1076 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 OR52N1Q8NH53 320 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 UTP15Q8TED0 518 aaKnown RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 NIPAL2Q9H841 368 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 MKLN1Q9UL63 735 aa9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 MTF2Q9Y483 593 aaPredicted RBP9.49□□□□□ -0.89
PTCHD4-201ENST00000339488 FZD9O00144 591 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 BCKDKO14874 412 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 KPNA5O15131 536 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 WDR47O94967 919 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 MPC2O95563 127 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ECDO95905 644 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ASS1P00966 412 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 TRAPPC2P0DI81 140 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 TRAPPC2BP0DI82 140 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 HOXD8P13378 290 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 PAMP19021 973 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 PTAFRP25105 342 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 CAPZA1P52907 286 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 NUBP1P53384 320 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 LIPEQ05469 1076 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 QPRTQ15274 297 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 GPR19Q15760 415 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 FSTL4Q6MZW2 842 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM45BPQ6NSW5 357 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 TFAP2EQ6VUC0 442 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 STRA8Q7Z7C7 330 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM124AQ86V42 546 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ZDHHC13Q8IUH4 622 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 FBXO30Q8TB52 745 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ENKURQ8TC29 256 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM45AQ8TCE6 357 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF431Q8TF32 576 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.48□□□□□ -0.898e-7■■■■■ 48.3
PTCHD4-201ENST00000339488 CXorf58Q96LI9 332 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SPSB2Q99619 263 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC25A23Q9BV35 468 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 FTHL17Q9BXU8 183 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SHARPINQ9H0F6 387 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC6A15Q9H2J7 730 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ALG2Q9H553 416 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 C1orf112Q9NSG2 853 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 TFCP2L1Q9NZI6 479 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC39A10Q9ULF5 831 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 PCDHGB2Q9Y5G2 931 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 BTAF1O14981 1849 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 PCNTO95613 3336 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 A0A0J9YYE9 177 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SH3D21A4FU49 640 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 M0R082 166 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ANGPT2O15123 496 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 MSH4O15457 936 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 MAFO75444 373 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 CNTN5O94779 1100 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ALDOCP09972 364 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ERCC2P18074 760 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 HRH2P25021 359 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 CTSKP43235 329 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 RPS5P46782 204 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 GNPDA1P46926 289 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 OR4D2P58180 307 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC35A2P78381 396 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF91Q05481 1191 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 GPR17Q13304 367 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 GRK1Q15835 563 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 USP39Q53GS9 565 aaKnown RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 GPR158Q5T848 1215 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 LIPMQ5VYY2 423 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 DPP8Q6V1X1 898 aaPredicted RBP9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 RASSF6Q6ZTQ3 369 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM92BQ6ZTR7 304 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 OR11H4Q8NGC9 324 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 ELP4Q96EB1 424 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 C19orf60Q96EN9 201 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SDCBP2Q9H190 292 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 KCMF1Q9P0J7 381 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC6A14Q9UN76 642 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 PEX16Q9Y5Y5 336 aa9.48□□□□□ -0.89
PTCHD4-201ENST00000339488 OR2A25A4D2G3 310 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 DDX39AO00148 427 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC16A4O15374 487 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 RGS10O43665 173 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 FZD6O60353 706 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 UGT2B17O75795 530 aa9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 POP7O75817 140 aaKnown RBP9.47□□□□□ -0.89
PTCHD4-201ENST00000339488 PAPSS2O95340 614 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms