RNA–Protein interactions for RNA: ENST00000338995.10

COMMD4-202, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-202ENST00000338995 ZRANB3Q5FWF4 1079 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 TAS2R42Q7RTR8 314 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 CDKL3Q8IVW4 592 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-202ENST00000338995 ZADH2Q8N4Q0 377 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 PHC3Q8NDX5 983 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 OR52E1Q8NGJ3 308 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 PROKR1Q8TCW9 393 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 DENND1AQ8TEH3 1009 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 PTERQ96BW5 349 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 HEMGNQ9BXL5 484 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 AP1M1Q9BXS5 423 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 FAM96AQ9H5X1 160 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 TXLNGQ9NUQ3 528 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 ACTR10Q9NZ32 417 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 LUZP4Q9P127 313 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 NDOR1Q9UHB4 597 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 POLG2Q9UHN1 485 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 B3GNT3Q9Y2A9 372 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 EFR3BQ9Y2G0 817 aa13.77□□□□□ -0.21
COMMD4-202ENST00000338995 USP9XQ93008 2570 aaPredicted RBP13.77□□□□□ -0.21
COMMD4-202ENST00000338995 AKR1B15C9JRZ8 316 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 QSOX1O00391 747 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 SGTAO43765 313 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 MFAP3LO75121 409 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 AP2A2O94973 939 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 PTMSP20962 102 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 SHMT2P34897 504 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 ADRA1AP35348 466 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 PRKG2Q13237 762 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 MRPL49Q13405 166 aaKnown RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 MYBPC3Q14896 1274 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 SPA17Q15506 151 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 PLEKHN1Q494U1 663 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 ZNF789Q5FWF6 425 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 ANKRD20A2Q5SQ80 823 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 ANKRD20A1Q5TYW2 823 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 ANKRD20A3Q5VUR7 823 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 HIST2H2BCQ6DN03 193 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 TLDC1Q6P9B6 456 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 DARS2Q6PI48 645 aaKnown RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 FAM198BQ6UWH4 519 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 MAMDC2Q7Z304 686 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 TMTC1Q8IUR5 882 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 VSTM4Q8IW00 320 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 LILRA3Q8N6C8 439 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 Q8NA96 180 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 CALR3Q96L12 384 aaKnown RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 APOL2Q9BQE5 337 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 ILKAPQ9H0C8 392 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 OR52A5Q9H2C5 316 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 ATP13A2Q9NQ11 1180 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 IRAK4Q9NWZ3 460 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 IFT80Q9P2H3 777 aaPredicted RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 SRPK3Q9UPE1 567 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 SLC5A6Q9Y289 635 aa13.76□□□□□ -0.21
COMMD4-202ENST00000338995 PTRH2Q9Y3E5 179 aaKnown RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 COPG1Q9Y678 874 aaKnown RBP13.76□□□□□ -0.21
COMMD4-202ENST00000338995 A1L4Q6 167 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 MACROD2A1Z1Q3 448 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 PIM1P11309 404 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-202ENST00000338995 MC4RP32245 332 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 EIF3EP60228 445 aaKnown RBP13.75□□□□□ -0.21
COMMD4-202ENST00000338995 PLOD1Q02809 727 aaPredicted RBP13.75□□□□□ -0.21
COMMD4-202ENST00000338995 RAPSNQ13702 412 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 BOP1Q14137 746 aaKnown RBP13.75□□□□□ -0.21
COMMD4-202ENST00000338995 NR6A1Q15406 480 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 DCAF10Q5QP82 559 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 RHBDD2Q6NTF9 364 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 SPESP1Q6UW49 350 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 CDHR3Q6ZTQ4 885 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 ADGRF3Q8IZF5 1079 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 GALNT16Q8N428 558 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 CISD2Q8N5K1 135 aaKnown RBP13.75□□□□□ -0.21
COMMD4-202ENST00000338995 OR13C4Q8NGS5 318 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 NAT14Q8WUY8 206 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 NACC2Q96BF6 587 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 SNRNP40Q96DI7 357 aaKnown RBP13.75□□□□□ -0.21
COMMD4-202ENST00000338995 VPS50Q96JG6 964 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 C5orf34Q96MH7 638 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 TTC1Q99614 292 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 TBL1YQ9BQ87 522 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 NDC1Q9BTX1 674 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 CHRNA10Q9GZZ6 450 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 KLHL25Q9H0H3 589 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 ARNT2Q9HBZ2 717 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 AGPAT4Q9NRZ5 378 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 ASF1AQ9Y294 204 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 CACNA1DQ01668 2161 aa13.75□□□□□ -0.21
COMMD4-202ENST00000338995 CREBBPQ92793 2442 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 ANKUB1A6NFN9 424 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 LIN7AO14910 233 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-202ENST00000338995 KCNN4O15554 427 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 RBP3P10745 1247 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 PVRP15151 417 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 ACRV1P26436 265 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 PSMB4P28070 264 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 ZNF140P52738 457 aaPredicted RBP13.74□□□□□ -0.21
COMMD4-202ENST00000338995 CACNG1Q06432 222 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 CYP2A13Q16696 494 aa13.74□□□□□ -0.21
COMMD4-202ENST00000338995 FAM69BQ5VUD6 431 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms