RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 PPP4R2Q9NY27 417 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 ZKSCAN7Q9P0L1 754 aaPredicted RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 RARRES3Q9UL19 164 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 CDC14AQ9UNH5 594 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 CHMP3Q9Y3E7 222 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 NBEAL2Q6ZNJ1 2754 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 SONP18583 2426 aaKnown RBP1.48□□□□□ -2.17
LINC00643-201ENST00000334389 PI4KAP42356 2102 aa1.48□□□□□ -2.17
LINC00643-201ENST00000334389 IGKV3D-11A0A0A0MRZ8 115 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PRSS38A1L453 326 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 C2orf78A6NCI8 922 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SMCO2A6NFE2 343 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FIGNL2A6NMB9 653 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CFAP99D6REC4 459 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 J3QW42 95 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CACNB4O00305 520 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TO15178 435 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TMPRSS2O15393 492 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 EMC8O43402 210 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 BNIP3LO60238 219 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SLC19A2O60779 497 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 LRIG2O94898 1065 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FGFR1OPO95684 399 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TPOP07202 933 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 UMODP07911 640 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 F3P13726 295 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PRLRP16471 622 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 XBP1P17861 261 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FUT4P22083 530 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PTGER1P34995 402 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NNMTP40261 264 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PTGIRP43119 386 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ZFP36L2P47974 494 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 HK2P52789 917 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TXNL4AP83876 142 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 STRN3Q13033 797 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FRG1Q14331 258 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ANKRD1Q15327 319 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ADIPOQQ15848 244 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 GEN1Q17RS7 908 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 KLK9Q2XQG4 91 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NRN1LQ496H8 165 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ZNF394Q53GI3 561 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SERTAD4-AS1Q5TG53 156 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CCDC70Q6NSX1 233 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SLC39A4Q6P5W5 647 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FBXO38Q6PIJ6 1188 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 RNF165Q6ZSG1 346 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TMEM26Q6ZUK4 368 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 COX15Q7KZN9 410 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TRILQ7L0X0 811 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 C16orf82Q7Z2V1 217 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 YTHDF3Q7Z739 585 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 AMIGO1Q86WK6 493 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ZFAND4Q86XD8 727 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CCDC36Q8IYA8 594 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 UBQLNLQ8IYU4 475 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 LRRC25Q8N386 305 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 VWA5B2Q8N398 1253 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 RNF152Q8N8N0 203 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 OR13H1Q8NG92 308 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FOXD4L4Q8WXT5 416 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ANKRD36BP1Q96IX9 119 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 MAGED4Q96JG8 741 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CEP170P1Q96L14 293 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ADAD1Q96M93 576 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TSGA13Q96PP4 275 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ACCSQ96QU6 501 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TRIB3Q96RU7 358 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM6Q9C030 488 aaPredicted RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TRIM39Q9HCM9 518 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DDX19AQ9NUU7 478 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 LARSQ9P2J5 1176 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 FBLN5Q9UBX5 448 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DCTN4Q9UJW0 460 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 KLK9Q9UKQ9 250 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PLA2G4CQ9UP65 541 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TRAF3IP3Q9Y228 551 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 DTX4Q9Y2E6 619 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TRBV5-4A0A0C4DH59 114 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 OR5K3A6NET4 321 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 LACTBL1A8MY62 500 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 E7EWF7 191 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 F8W810 466 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SURF6O75683 361 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TM7SF2O76062 418 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CEACAM5P06731 702 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CD55P08174 381 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CYP21A2P08686 494 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ELFN1P0C7U0 828 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 SRCP12931 536 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 TNNT1P13805 278 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 PSMB1P20618 241 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 BMP5P22003 454 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 KIR2DL3P43628 341 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 CSNK1EP49674 416 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 STC1P52823 247 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 NDST1P52848 882 aa1.47□□□□□ -2.17
LINC00643-201ENST00000334389 ADARP55265 1226 aaKnown RBP1.47□□□□□ -2.17
LINC00643-201ENST00000334389 VSX2P58304 361 aaPredicted RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms