RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 COMMD2Q86X83 199 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 DEPDC4Q8N2C3 294 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 MRPL48Q96GC5 212 aaKnown RBP12.77□□□□□ -0.36
VSTM4-202ENST00000332853 MS4A4AQ96JQ5 239 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 SERHL2Q9H4I8 314 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 SERHLQ9NQF3 203 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 NLE1Q9NVX2 485 aaPredicted RBP12.77□□□□□ -0.36
VSTM4-202ENST00000332853 SMPD3Q9NY59 655 aaPredicted RBP12.77□□□□□ -0.36
VSTM4-202ENST00000332853 E7ESA3 106 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 CTSKP43235 329 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 PERM1Q5SV97 790 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 SWT1Q5T5J6 900 aaKnown RBP12.77□□□□□ -0.36
VSTM4-202ENST00000332853 AHI1Q8N157 1196 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 CACTIN-AS1Q8N1I8 211 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 KLHL23Q8NBE8 558 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 PIK3C3Q8NEB9 887 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 ANKRD49Q8WVL7 239 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 HERVK_113Q902F9 699 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 LRRC58Q96CX6 371 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 SUCOQ9UBS9 1254 aaKnown RBP12.77□□□□□ -0.36
VSTM4-202ENST00000332853 COLEC10Q9Y6Z7 277 aa12.77□□□□□ -0.36
VSTM4-202ENST00000332853 LAMB1P07942 1786 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 LOC730098B7Z3J9 87 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 TNFRSF11BO00300 401 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 MMP20O60882 483 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 CCNDBP1O95273 360 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 CSF2RAP15509 400 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 KELP23276 732 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 FSHRP23945 695 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 AFF1P51825 1210 aaKnown RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 GPR33Q49SQ1 333 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 TRIQKQ629K1 86 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 CENPNQ96H22 339 aaPredicted RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 C3orf14Q9HBI5 128 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 FBRSL1Q9HCM7 1045 aaKnown RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 ADAM30Q9UKF2 790 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 PIPSLA2A3N6 862 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 CAPN15O75808 1086 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 GDI1P31150 447 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 ACTR3P61158 418 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 HTRA3P83110 453 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 SPANXN2Q5MJ10 180 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF648Q5T619 568 aaPredicted RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 C6orf89Q6UWU4 347 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 TAF8Q7Z7C8 310 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 PNPLA1Q8N8W4 532 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 TEX47Q8TBZ9 253 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 LCN9Q8WX39 176 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 RBM4BQ9BQ04 359 aaKnown RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 RBM4Q9BWF3 364 aaKnown RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 TLR9Q9NR96 1032 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 SEMA3GQ9NS98 782 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 EHD3Q9NZN3 535 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 PAIP2BQ9ULR5 123 aaKnown RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 OR6A2O95222 327 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 ACP5P13686 325 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 AMZ2Q86W34 360 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 HID1Q8IV36 788 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 ARL10Q8N8L6 244 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 SLC22A17Q8WUG5 538 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 POF1BQ8WVV4 589 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 SLC38A2Q96QD8 506 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 CRISPLD1Q9H336 500 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 MRM3Q9HC36 420 aaKnown RBP12.77□□□□□ -0.37
VSTM4-202ENST00000332853 PLAGL1Q9UM63 463 aa12.77□□□□□ -0.37
VSTM4-202ENST00000332853 E7ENX8 843 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 GNAZP19086 355 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 RPL10P27635 214 aaKnown RBP12.76□□□□□ -0.37
VSTM4-202ENST00000332853 LAPTM5Q13571 262 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 C22orf39Q6P5X5 142 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 ADAMTS15Q8TE58 950 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 PIH1D2Q8WWB5 315 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 NSMCE3Q96MG7 304 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 CHID1Q9BWS9 393 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 TTLL2Q9BWV7 592 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 DPEP2Q9H4A9 486 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 CCNA2P20248 432 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 NT5EP21589 574 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 COX10Q12887 443 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 BIKQ13323 160 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 LY6G5CQ5SRR4 150 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF678Q5SXM1 525 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 CDC73Q6P1J9 531 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 SATL1Q86VE3 508 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 FAM81AQ8TBF8 368 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 IMP4Q96G21 291 aaKnown RBP12.76□□□□□ -0.37
VSTM4-202ENST00000332853 RNF11Q9Y3C5 154 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 MYH9P35579 1960 aaKnown RBP12.76□□□□□ -0.37
VSTM4-202ENST00000332853 ZNF623O75123 536 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 TSC22D2O75157 780 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 PRPS2P11908 318 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 VIPR1P32241 457 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 GTPBP3Q969Y2 492 aaKnown RBP12.76□□□□□ -0.37
VSTM4-202ENST00000332853 NSUN5Q96P11 429 aaKnown RBP12.76□□□□□ -0.37
VSTM4-202ENST00000332853 TSGA13Q96PP4 275 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 CXCL16Q9H2A7 254 aa12.76□□□□□ -0.37
VSTM4-202ENST00000332853 NSUN3Q9H649 340 aaKnown RBP12.76□□□□□ -0.37
VSTM4-202ENST00000332853 ERGIC3Q9Y282 383 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms