RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 CTSL3PQ5NE16 218 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 CACHD1Q5VU97 1274 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 TTC23LQ6PF05 361 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 AMIGO1Q86WK6 493 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 FAM129CQ86XR2 697 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 ZNF248Q8NDW4 579 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 OR5AR1Q8NGP9 310 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 LKAAEAR1Q8TD35 194 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 USP7Q93009 1102 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 CFAP36Q96G28 342 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 FOPNLQ96NB1 174 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 CD180Q99467 661 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 ASPSCR1Q9BZE9 553 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 FBXO6Q9NRD1 293 aaPredicted RBP13.63□□□□□ -0.23
LIMS1-201ENST00000332345 SLC39A1Q9NY26 324 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 CHMP2BQ9UQN3 213 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 CDYLQ9Y232 598 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 TDRKHQ9Y2W6 561 aaKnown RBP13.63□□□□□ -0.23
LIMS1-201ENST00000332345 MRFAP1Q9Y605 127 aa13.63□□□□□ -0.23
LIMS1-201ENST00000332345 E7ESA3 106 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 EIF3HO15372 352 aaKnown RBP eCLIP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 HAUS5O94927 633 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 EIF2S3P41091 472 aaKnown RBP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 ETV5P41161 510 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 LEPRP48357 1165 aaKnown RBP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 CARSP49589 748 aaKnown RBP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 RAB15P59190 212 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 MC2RQ01718 297 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 FRG1Q14331 258 aaKnown RBP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 ZNF789Q5FWF6 425 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 DCAF12Q5T6F0 453 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 C8orf74Q6P047 294 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 UNC5DQ6UXZ4 953 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 UNC5AQ6ZN44 842 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 FAM92BQ6ZTR7 304 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 KIAA0408Q6ZU52 694 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 PRSS42Q7Z5A4 293 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 ANKMY2Q8IV38 441 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 VRK3Q8IV63 474 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 UNC5BQ8IZJ1 945 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 CARFQ8N187 725 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 C2CD4AQ8NCU7 369 aaPredicted RBP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 OR52E1Q8NGJ3 308 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 CFAP61Q8NHU2 1237 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 PYROXD1Q8WU10 500 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 SKA2Q8WVK7 121 aaPredicted RBP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 KLHL6Q8WZ60 621 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 UBXN4Q92575 508 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 CERS2Q96G23 380 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 DCBLD2Q96PD2 775 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 HGH1Q9BTY7 390 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 DPH1Q9BZG8 443 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 ZNF768Q9H5H4 540 aaKnown RBP13.62□□□□□ -0.23
LIMS1-201ENST00000332345 FBXO8Q9NRD0 319 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 OCIAD1Q9NX40 245 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 KLHL42Q9P2K6 505 aa13.62□□□□□ -0.23
LIMS1-201ENST00000332345 ANKRD11Q6UB99 2663 aaPredicted RBP13.61□□□□□ -0.23
LIMS1-201ENST00000332345 LAMA5O15230 3695 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 A0A087WV48 116 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 TLCD2A6NGC4 264 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 NIPSNAP2O75323 286 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 POLR2CP19387 275 aaPredicted RBP13.61□□□□□ -0.23
LIMS1-201ENST00000332345 CD82P27701 267 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 SHMT2P34897 504 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 ARL4DP49703 201 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 SEPHS1P49903 392 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 PLTPP55058 493 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 TTLL9Q3SXZ7 439 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 STEAP4Q687X5 459 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 UGT3A1Q6NUS8 523 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 CYB5D1Q6P9G0 228 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 KMT5CQ86Y97 462 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 CNTN4Q8IWV2 1026 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 PALM2Q8IXS6 379 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 ZBED8Q8IZ13 594 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 FBXO36Q8NEA4 188 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 MAGEC3Q8TD91 643 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 KCNJ9Q92806 393 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 ART4Q93070 314 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 TEFMQ96QE5 360 aaKnown RBP13.61□□□□□ -0.23
LIMS1-201ENST00000332345 ZPBPQ9BS86 351 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 LRRC1Q9BTT6 524 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 DDA1Q9BW61 102 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 GRHL1Q9NZI5 618 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 OR6C2Q9NZP2 312 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 SEMA5BQ9P283 1151 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 PCDHGA3Q9Y5H0 932 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 CELSR3Q9NYQ7 3312 aa13.61□□□□□ -0.23
LIMS1-201ENST00000332345 EPG5Q9HCE0 2579 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 GSAPA4D1B5 854 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 CTAGE15A4D2H0 777 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 C2orf74A8MZ97 194 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 C9orf172C9J069 976 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 POLR1CO15160 346 aaPredicted RBP13.6□□□□□ -0.23
LIMS1-201ENST00000332345 MAP3K7O43318 606 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 KIF1CO43896 1103 aaKnown RBP13.6□□□□□ -0.23
LIMS1-201ENST00000332345 PRAMEF10O60809 474 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 AHSGP02765 367 aa13.6□□□□□ -0.23
LIMS1-201ENST00000332345 CTAGE8P0CG41 777 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms