RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 WNT1P04628 370 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 THEGLP0DJG4 465 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 THOP1P52888 689 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 BOP1Q14137 746 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 ZNF658BQ4V348 819 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 SLC9B1Q4ZJI4 515 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 SH2D4BQ5SQS7 431 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 PMS2CLQ68D20 193 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 ENPP7Q6UWV6 458 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 LRRTM4Q86VH4 590 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 RGL4Q8IZJ4 473 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 OR56A4Q8NGH8 313 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 DNASE2BQ8WZ79 361 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 OR1E3Q8WZA6 343 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 PDXPQ96GD0 296 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 RAB3IPQ96QF0 476 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 CCDC28BQ9BUN5 200 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 TM9SF3Q9HD45 589 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 GPR27Q9NS67 375 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 ARMCX1Q9P291 453 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 GULP1Q9UBP9 304 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 ZNHIT2Q9UHR6 403 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 MOSPD1Q9UJG1 213 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 TSR3Q9UJK0 312 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 IKZF3Q9UKT9 509 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 PNMA8BQ9ULN7 279 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 SUFUQ9UMX1 484 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 TRIM33Q9UPN9 1127 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 SDK1Q7Z5N4 2213 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 A0A1W2PR77 199 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 GPR89AB7ZAQ6 455 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 SCAMP1O15126 338 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 POP7O75817 140 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 GPR89BP0CG08 455 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 ESRRAP11474 423 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 GFAPP14136 432 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 KELP23276 732 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 HTR1BP28222 390 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 RGS4P49798 205 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 RACK1P63244 317 aaKnown RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 KCNJ2P63252 427 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 PFKFB4Q16877 469 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 ZNF528Q3MIS6 628 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 ACSBG2Q5FVE4 666 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 ACAD11Q709F0 780 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 CUZD1Q86UP6 607 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 FBXO39Q8N4B4 442 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 LILRA3Q8N6C8 439 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 EXT2Q93063 718 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 SCARF2Q96GP6 870 aaPredicted RBP18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 C1QTNF3Q9BXJ4 246 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 RASSF4Q9H2L5 321 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 TCF7L2Q9NQB0 619 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 SLC23A2Q9UGH3 650 aa18.35■□□□□ 0.53
EXOSC3-201ENST00000327304 PRSS38A1L453 326 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 NPEPPSL1A6NEC2 478 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 SUPT3HB4E1H0 165 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 SUPT3HO75486 399 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 ITPKAP23677 461 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 DGKAP23743 735 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 DHPSP49366 369 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 PLK5Q496M5 336 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 WDR45BQ5MNZ6 344 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 XKR5Q6UX68 686 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 C11orf74Q86VG3 221 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 TREML1Q86YW5 311 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 TSACCQ96A04 125 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 KLHDC7BQ96G42 594 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 LINC00615Q96LM1 132 aaPredicted RBP18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 CAAP1Q9H8G2 361 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 ZSCAN32Q9NX65 697 aa18.34■□□□□ 0.53
EXOSC3-201ENST00000327304 CD38P28907 300 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 GNPDA1P46926 289 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 HSPA14Q0VDF9 509 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 ALG11Q2TAA5 492 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 PYCR3Q53H96 274 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 ADAMTSL2Q86TH1 951 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 GALNT13Q8IUC8 556 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 VRK3Q8IV63 474 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 KIF2BQ8N4N8 673 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 MFSD2AQ8NA29 543 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 MAELQ96JY0 434 aaKnown RBP18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 SHCBP1LQ9BZQ2 653 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 RMI1Q9H9A7 625 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 CARS2Q9HA77 564 aaKnown RBP18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 KLQ9UEF7 1012 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 TAGLN3Q9UI15 199 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 CDYLQ9Y232 598 aa18.33■□□□□ 0.53
EXOSC3-201ENST00000327304 PRR5-ARHGAP8B1AHC4 643 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 KMOO15229 486 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 PREPP48147 710 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 ARHGAP8P85298 464 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 GBX1Q14549 363 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 TTLL9Q3SXZ7 439 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 PLEKHS1Q5SXH7 462 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 LYSMD4Q5XG99 296 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 FAM83HQ6ZRV2 1179 aaPredicted RBP18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 GPSM1Q86YR5 675 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 OXR1Q8N573 874 aa18.33■□□□□ 0.52
EXOSC3-201ENST00000327304 ZBTB44Q8NCP5 570 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms