RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 LRIT3Q3SXY7 679 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 HENMT1Q5T8I9 393 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 PRMT9Q6P2P2 845 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SLC2A7Q6PXP3 512 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SPPL2CQ8IUH8 684 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 GALNT4Q8N4A0 578 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 CANT1Q8WVQ1 401 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 LRTOMTQ8WZ04 291 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 PPWD1Q96BP3 646 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 TMEM74Q96NL1 305 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 P2RY13Q9BPV8 354 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 WRAP53Q9BUR4 548 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 MTIF3Q9H2K0 278 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 ACTL8Q9H568 366 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SLC32A1Q9H598 525 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 INTS7Q9NVH2 962 aaKnown RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 SCOCQ9UIL1 159 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 LEF1Q9UJU2 399 aaPredicted RBP7.41□□□□□ -1.22
IFT88-201ENST00000319980 CCL27Q9Y4X3 112 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SNX13Q9Y5W8 968 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 AK5Q9Y6K8 562 aa7.41□□□□□ -1.22
IFT88-201ENST00000319980 SZT2Q5T011 3432 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 TMEM202A6NGA9 273 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 INPP4BO15327 924 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 RGS14O43566 566 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 NUAK1O60285 661 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 RNASEH1O60930 286 aaKnown RBP7.4□□□□□ -1.22
IFT88-201ENST00000319980 SEC22BO75396 215 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 RSL1D1O76021 490 aaKnown RBP7.4□□□□□ -1.22
IFT88-201ENST00000319980 CLDN9O95484 217 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 C8GP07360 202 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 SLC6A11P48066 632 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 MRPL19P49406 292 aaKnown RBP7.4□□□□□ -1.22
IFT88-201ENST00000319980 DGKQP52824 942 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 TAGLNQ01995 201 aaKnown RBP7.4□□□□□ -1.22
IFT88-201ENST00000319980 FOLH1Q04609 750 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 GPM6BQ13491 265 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 TLR1Q15399 786 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 PTCHD3Q3KNS1 767 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 SLC44A4Q53GD3 710 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 FAM78AQ5JUQ0 283 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 ZFAND4Q86XD8 727 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 KIAA2013Q8IYS2 634 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 RGL4Q8IZJ4 473 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 ASZ1Q8WWH4 475 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 NXPE3Q969Y0 559 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 SLCO4A1Q96BD0 722 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 AP2M1Q96CW1 435 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 ERLEC1Q96DZ1 483 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 PPP3R2Q96LZ3 170 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 ZSCAN5AQ9BUG6 496 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 ATG10Q9H0Y0 220 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 VCXQ9H320 206 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 ALG2Q9H553 416 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 PIF1Q9H611 641 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 HEBP1Q9NRV9 189 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 SMOXQ9NWM0 555 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 AURKCQ9UQB9 309 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 SLC22A14Q9Y267 594 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 PCDHA9Q9Y5H5 950 aa7.4□□□□□ -1.22
IFT88-201ENST00000319980 GBF1Q92538 1859 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 TCRBV3S1A0A5B6 114 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 ZNF839A8K0R7 811 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 SGTAO43765 313 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 WDR47O94967 919 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 LYNP07948 512 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 SRPRAP08240 638 aaKnown RBP7.4□□□□□ -1.23
IFT88-201ENST00000319980 EPORP19235 508 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 ATP6V1B2P21281 511 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 SLC7A1P30825 629 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 GNPDA1P46926 289 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 NEK2P51955 445 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 DCDC1P59894 354 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 NANOGP8Q6NSW7 305 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 ERAP2Q6P179 960 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 METTL2BQ6P1Q9 378 aaKnown RBP7.4□□□□□ -1.23
IFT88-201ENST00000319980 LIPIQ6XZB0 460 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 PARS2Q7L3T8 475 aaKnown RBP7.4□□□□□ -1.23
IFT88-201ENST00000319980 AMIGO2Q86SJ2 522 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 TMEM126BQ8IUX1 230 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 TRAM1L1Q8N609 369 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 TMEM102Q8N9M5 508 aaPredicted RBP7.4□□□□□ -1.23
IFT88-201ENST00000319980 ADCY4Q8NFM4 1077 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 OR2T34Q8NGX1 318 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 OR2T3Q8NH03 318 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 MCOLN3Q8TDD5 553 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 BPIFB1Q8TDL5 484 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 UBTD2Q8WUN7 234 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 BTN2A2Q8WVV5 523 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 EME1Q96AY2 570 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 LRIG1Q96JA1 1093 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 NR1H4Q96RI1 486 aaPredicted RBP7.4□□□□□ -1.23
IFT88-201ENST00000319980 NANOGQ9H9S0 305 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 NOTCH4Q99466 2003 aa7.4□□□□□ -1.23
IFT88-201ENST00000319980 TSPAN11A1L157 253 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 A6NHS1 94 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 EIF3FO00303 357 aaPredicted RBP7.39□□□□□ -1.23
IFT88-201ENST00000319980 MANBAO00462 879 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 ANKRD28O15084 1053 aa7.39□□□□□ -1.23
IFT88-201ENST00000319980 KPNA5O15131 536 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms