RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ITGB1BP2Q9UKP3 347 aa18.74■□□□□ 0.59
RTN4-201ENST00000317610 TRIM43BA6NCK2 446 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 PTGES3LE9PB15 166 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 BCKDKO14874 412 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 RGS14O43566 566 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 CREG1O75629 220 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 RPLP2P05387 115 aaKnown RBP18.73■□□□□ 0.59
RTN4-201ENST00000317610 ALOX5P09917 674 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 GZMMP51124 257 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 CFAP52Q8N1V2 620 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 TTC9BQ8N6N2 239 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 NAT16Q8N8M0 369 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 OR7A2PQ8NGA2 310 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 GPR152Q8TDT2 470 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 YIPF6Q96EC8 236 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 REXO5Q96IC2 774 aaKnown RBP18.73■□□□□ 0.59
RTN4-201ENST00000317610 RETREG1Q9H6L5 497 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 SCUBE2Q9NQ36 999 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 INTS6Q9UL03 887 aaKnown RBP18.73■□□□□ 0.59
RTN4-201ENST00000317610 SLC28A1O00337 649 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 FFAR2O15552 330 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 KDELR3O43731 214 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 GLUD1P00367 558 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 F11P03951 625 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 S100BP04271 92 aaPredicted RBP18.73■□□□□ 0.59
RTN4-201ENST00000317610 PGRP06401 933 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 JUNDP17535 347 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 PRKACGP22612 351 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 IFITM3Q01628 133 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 TAF10Q12962 218 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 ADPRMQ3LIE5 342 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 SPANXN4Q5MJ08 99 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 STK40Q8N2I9 435 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 ZFP90Q8TF47 636 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 TBC1D20Q96BZ9 403 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 TBCDQ9BTW9 1192 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 DPY30Q9C005 99 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 GABARAPL1Q9H0R8 117 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 SARS2Q9NP81 518 aaKnown RBP18.73■□□□□ 0.59
RTN4-201ENST00000317610 DNMT3BQ9UBC3 853 aaKnown RBP18.73■□□□□ 0.59
RTN4-201ENST00000317610 FBXO10Q9UK96 956 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 INVSQ9Y283 1065 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 TRIM17Q9Y577 477 aa18.73■□□□□ 0.59
RTN4-201ENST00000317610 IQCF5A8MTL0 148 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 TMEM189-UBE2V1I3L0A0 370 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 E2F6O75461 281 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 PFKLP17858 780 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 TGM1P22735 817 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 CD6P30203 668 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 ABI1Q8IZP0 508 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 DNAJB8Q8NHS0 232 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 EXOC2Q96KP1 924 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 DUSP21Q9H596 190 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 ATP13A3Q9H7F0 1226 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 ORC6Q9Y5N6 252 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 RAI2Q9Y5P3 530 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 RAD51BO15315 384 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 STX7O15400 261 aaKnown RBP18.72■□□□□ 0.59
RTN4-201ENST00000317610 CNOT3O75175 753 aaKnown RBP18.72■□□□□ 0.59
RTN4-201ENST00000317610 ANGPTL1O95841 491 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 PPP1R8Q12972 351 aaKnown RBP18.72■□□□□ 0.59
RTN4-201ENST00000317610 RAPSNQ13702 412 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 AGAP7PQ5VUJ5 663 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 SHQ1Q6PI26 577 aaKnown RBP18.72■□□□□ 0.59
RTN4-201ENST00000317610 CXCL17Q6UXB2 119 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 TRIM46Q7Z4K8 759 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 CNIH3Q8TBE1 160 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 MCOLN3Q8TDD5 553 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 RORBQ92753 470 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 CEP295NLQ96MC4 621 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 CPPED1Q9BRF8 314 aaPredicted RBP18.72■□□□□ 0.59
RTN4-201ENST00000317610 CCDC90BQ9GZT6 254 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 EXD2Q9NVH0 621 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 HSPE1-MOB4S4R3N1 261 aa18.72■□□□□ 0.59
RTN4-201ENST00000317610 TMEM247A6NEH6 219 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 ANKRD66B4E2M5 251 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 H3BNC9 293 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 TAPBPO15533 448 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 AQP9O43315 295 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 XPNPEP2O43895 674 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 RECQL5O94762 991 aaPredicted RBP18.71■□□□□ 0.59
RTN4-201ENST00000317610 WDR47O94967 919 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 SLC6A4P31645 630 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 MAGEA2P43356 314 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 KPNA1P52294 538 aaPredicted RBP18.71■□□□□ 0.59
RTN4-201ENST00000317610 CXCR4P61073 352 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 DSC1Q08554 894 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 CD300CQ08708 224 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 DGUOKQ16854 277 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 SYT6Q5T7P8 510 aaPredicted RBP18.71■□□□□ 0.59
RTN4-201ENST00000317610 NEK10Q6ZWH5 1172 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 DET1Q7L5Y6 550 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 LIX1Q8N485 282 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 ATAD1Q8NBU5 361 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 SETD9Q8NE22 299 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 PHF10Q8WUB8 498 aaKnown RBP18.71■□□□□ 0.59
RTN4-201ENST00000317610 ZNF300Q96RE9 604 aaPredicted RBP18.71■□□□□ 0.59
RTN4-201ENST00000317610 BPIFA1Q9NP55 256 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 ELOVL2Q9NXB9 296 aa18.71■□□□□ 0.59
RTN4-201ENST00000317610 ZMYM5Q9UJ78 669 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms