RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 MTFMTQ96DP5 389 aaKnown RBP20.17■□□□□ 0.82
TTC39C-202ENST00000317571 ASIC4Q96FT7 647 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 YME1L1Q96TA2 773 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 CAAP1Q9H8G2 361 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 CARS2Q9HA77 564 aaKnown RBP20.17■□□□□ 0.82
TTC39C-202ENST00000317571 B4GALT6Q9UBX8 382 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 TRPS1Q9UHF7 1281 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 PCDHB3Q9Y5E6 796 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 AREL1O15033 823 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 CLTBP09497 229 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 MSH3P20585 1137 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 RPS6KA3P51812 740 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 CDH15P55291 814 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 MAP7Q14244 749 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 CRY1Q16526 586 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 FAM174BQ3ZCQ3 159 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 SPANXN4Q5MJ08 99 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 GLYATQ6IB77 296 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 TBPL2Q6SJ96 375 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 SERPINA13PQ6UXR4 307 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 LIX1Q8N485 282 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 TSPAN14Q8NG11 270 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 CLHC1Q8NHS4 586 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 GTF2H4Q92759 462 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 ZNF583Q96ND8 569 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 COPS8Q99627 209 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 ADI1Q9BV57 179 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 BRD9Q9H8M2 597 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 PNPLA3Q9NST1 481 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 KCTD5Q9NXV2 234 aa20.17■□□□□ 0.82
TTC39C-202ENST00000317571 DYTNA2CJ06 578 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 TRIM43BA6NCK2 446 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 MTX2O75431 263 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 STK16O75716 305 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 RASAL1O95294 804 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 EBLN1P0CF75 366 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 C1orf53Q5VUE5 145 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 USP45Q70EL2 814 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 RIMKLAQ8IXN7 391 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 KREMEN2Q8NCW0 462 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 SLC13A3Q8WWT9 602 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 TRIM43Q96BQ3 446 aaPredicted RBP20.16■□□□□ 0.82
TTC39C-202ENST00000317571 SLC6A13Q9NSD5 602 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 SLC25A37Q9NYZ2 338 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 ULK1O75385 1050 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 EPB42P16452 691 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 RPIAP49247 311 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 GBX1Q14549 363 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 GTDC1Q4AE62 458 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 KRT80Q6KB66 452 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 B3GNT6Q6ZMB0 384 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 RNF165Q6ZSG1 346 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 METTL3Q86U44 580 aaKnown RBP20.16■□□□□ 0.82
TTC39C-202ENST00000317571 FAM86B1Q8N7N1 296 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 BPIFB1Q8TDL5 484 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 TMIGD2Q96BF3 282 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 FBXL20Q96IG2 436 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 ACPTQ9BZG2 426 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 CRISPLD2Q9H0B8 497 aa20.16■□□□□ 0.82
TTC39C-202ENST00000317571 SOX17Q9H6I2 414 aaPredicted RBP20.16■□□□□ 0.82
TTC39C-202ENST00000317571 RGS14O43566 566 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 PRAMEF4O60810 478 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 AOAHP28039 575 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 SPINT3P49223 89 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 SH3BGRP55822 239 aaPredicted RBP20.15■□□□□ 0.82
TTC39C-202ENST00000317571 MERTKQ12866 999 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 TTLL9Q3SXZ7 439 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 CARD16Q5EG05 197 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 PRAMEF9Q5VWM5 478 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 DNAJC14Q6Y2X3 702 aaPredicted RBP20.15■□□□□ 0.82
TTC39C-202ENST00000317571 C9orf16Q9BUW7 83 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 CHID1Q9BWS9 393 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 NTN4Q9HB63 628 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 NEDD8-MDP1E9PL57 170 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 MOSPD3O75425 235 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 B3GALT4O96024 378 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 NR1H2P55055 460 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 PHC1P78364 1004 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 HSPA14Q0VDF9 509 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 CPSF6Q16630 551 aaKnown RBP eCLIP20.15■□□□□ 0.82
TTC39C-202ENST00000317571 LRRC26Q2I0M4 334 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 SLC36A3Q495N2 470 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 TMEM215Q68D42 235 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 CPEB1Q9BZB8 566 aaKnown RBP20.15■□□□□ 0.82
TTC39C-202ENST00000317571 LRTM1Q9HBL6 345 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 ARL15Q9NXU5 204 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 DLGAP4Q9Y2H0 992 aa20.15■□□□□ 0.82
TTC39C-202ENST00000317571 RNF103-CHMP3A0A140T963 221 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 UPK1AO00322 258 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 WDR47O94967 919 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 ASLP04424 464 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 UMPSP11172 480 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 PPM1AP35813 382 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 GNPDA1P46926 289 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 PTPN5P54829 565 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 USP39Q53GS9 565 aaKnown RBP20.14■□□□□ 0.82
TTC39C-202ENST00000317571 OTOP2Q7RTS6 562 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 PROSER1Q86XN7 944 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 TBC1D21Q8IYX1 336 aa20.14■□□□□ 0.82
TTC39C-202ENST00000317571 C10orf111Q8N326 155 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms