RNA–Protein interactions for RNA: ENST00000315962.8

TRIM55-202, Transcript of tripartite motif containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM55, Length 2,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-202ENST00000315962 MAGEA8P43361 318 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 DLX2Q07687 328 aaPredicted RBP7.46□□□□□ -1.21
TRIM55-202ENST00000315962 PMS2P3Q13401 168 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ZFP1Q6P2D0 407 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 USP45Q70EL2 814 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 SYVN1Q86TM6 617 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 MMAAQ8IVH4 418 aaKnown RBP7.46□□□□□ -1.21
TRIM55-202ENST00000315962 SLC22A15Q8IZD6 547 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 STK40Q8N2I9 435 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 DNAJB14Q8TBM8 379 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 TWIST2Q8WVJ9 160 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 VPS33AQ96AX1 596 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ISOC1Q96CN7 298 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ASB9Q96DX5 294 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 C19orf60Q96EN9 201 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 TEX37Q96LM6 180 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 SAMD11Q96NU1 681 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 NRTNQ99748 197 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 HAUS8Q9BT25 410 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 RIOK2Q9BVS4 552 aaKnown RBP7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF385DQ9H6B1 395 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 EML4Q9HC35 981 aaKnown RBP7.46□□□□□ -1.21
TRIM55-202ENST00000315962 OAZ3Q9UMX2 235 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF232Q9UNY5 417 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 ZNF510Q9Y2H8 683 aa7.46□□□□□ -1.21
TRIM55-202ENST00000315962 OAS3Q9Y6K5 1087 aaKnown RBP7.46□□□□□ -1.21
TRIM55-202ENST00000315962 HEPACAM2A8MVW5 462 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 EI24O14681 340 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 KERAO60938 352 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 LATS1O95835 1130 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 C1SP09871 688 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 ZNF182P17025 639 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-202ENST00000315962 VARSP26640 1264 aaKnown RBP7.46□□□□□ -1.22
TRIM55-202ENST00000315962 SPAM1P38567 509 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 CLCN2P51788 898 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 ACOX1Q15067 660 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 FNDC3BQ53EP0 1204 aaKnown RBP7.46□□□□□ -1.22
TRIM55-202ENST00000315962 RABL3Q5HYI8 236 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 AARS2Q5JTZ9 985 aaKnown RBP7.46□□□□□ -1.22
TRIM55-202ENST00000315962 METTL21CQ5VZV1 264 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 TPRG1Q6ZUI0 275 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 GPR141Q7Z602 305 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 SNX20Q7Z614 316 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 RAB44Q7Z6P3 723 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-202ENST00000315962 CARM1Q86X55 608 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 RNF175Q8N4F7 328 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 MAGEE2Q8TD90 523 aaPredicted RBP7.46□□□□□ -1.22
TRIM55-202ENST00000315962 KCNJ9Q92806 393 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 CHFRQ96EP1 664 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 MRGPRX3Q96LB0 322 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 TMEM74Q96NL1 305 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 PLA2G2FQ9BZM2 168 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 DERL2Q9GZP9 239 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 ATG10Q9H0Y0 220 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 P2RY12Q9H244 342 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 EPB41L1Q9H4G0 881 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 POLR1BQ9H9Y6 1135 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 SLC28A3Q9HAS3 691 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 NDUFA13Q9P0J0 144 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 CHD5Q8TDI0 1954 aa7.46□□□□□ -1.22
TRIM55-202ENST00000315962 ANKRD36A6QL64 1941 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 NME4O00746 187 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 NPHS1O60500 1241 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ESR1P03372 595 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 EEF1B2P24534 225 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PREPP48147 710 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 RXRGP48443 463 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 POLD2P49005 469 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 HTR6P50406 440 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 NEK2P51955 445 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SEC13P55735 322 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ABRQ12979 859 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 CBX3Q13185 183 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 LRP8Q14114 963 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 UGT3A2Q3SY77 523 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ANKRD34AQ69YU3 496 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 LETMD1Q6P1Q0 360 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 DHFR2Q86XF0 187 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SLC22A9Q8IVM8 553 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 NXPE1Q8N323 547 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 C2orf73Q8N5S3 287 aaPredicted RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 FRS2Q8WU20 508 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 THAP11Q96EK4 314 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 TCF12Q99081 682 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 COPS8Q99627 209 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 OSBPL11Q9BXB4 747 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SPAG4Q9NPE6 437 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 PFDN4Q9NQP4 134 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 EXD2Q9NVH0 621 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ELOVL2Q9NXB9 296 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 DGKBQ9Y6T7 804 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 C16orf96A6NNT2 1141 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 FADS2P1A8MWK0 482 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 AZIN1O14977 448 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 FFAR2O15552 330 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 H2AFYO75367 372 aaKnown RBP7.45□□□□□ -1.22
TRIM55-202ENST00000315962 ELK4P28324 431 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SPINT3P49223 89 aa7.45□□□□□ -1.22
TRIM55-202ENST00000315962 SUOXP51687 545 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms