RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 PROKR1Q8TCW9 393 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 TSPEARQ8WU66 669 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 CDCA3Q99618 268 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-201ENST00000315286 PLA2G2FQ9BZM2 168 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 HEBP1Q9NRV9 189 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 TRPS1Q9UHF7 1281 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 ZFC3H1O60293 1989 aaKnown RBP17.95■□□□□ 0.46
CCDC43-201ENST00000315286 COL4A3Q01955 1670 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 ASPDHA6ND91 283 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 FXYD1O00168 92 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 AREL1O15033 823 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 SP140Q13342 867 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 RUNX3Q13761 415 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 SAMD4BQ5PRF9 694 aaKnown RBP17.95■□□□□ 0.46
CCDC43-201ENST00000315286 SYCE2Q6PIF2 218 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 NEK10Q6ZWH5 1172 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 TCAIMQ8N3R3 496 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 PYCR2Q96C36 320 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 HOPXQ9BPY8 73 aaPredicted RBP17.95■□□□□ 0.46
CCDC43-201ENST00000315286 ZIM2Q9NZV7 527 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 ZNHIT2Q9UHR6 403 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 CDH7Q9ULB5 785 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 CNOT6Q9ULM6 557 aaKnown RBP17.95■□□□□ 0.46
CCDC43-201ENST00000315286 UNC80Q8N2C7 3258 aa17.95■□□□□ 0.46
CCDC43-201ENST00000315286 ULK1O75385 1050 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 SOD1P00441 154 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 G6PDP11413 515 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 ADRB3P13945 408 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 CYP2A7P20853 494 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 GJA4P35212 333 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 IL12RB1P42701 662 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 POLR2JP52435 117 aaKnown RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 YBX1P67809 324 aaKnown RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 FCHO2Q0JRZ9 810 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 CAPRIN1Q14444 709 aaKnown RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 PTCHD3Q3KNS1 767 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 SGO1Q5FBB7 561 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 COQ5Q5HYK3 327 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 HABP4Q5JVS0 413 aaKnown RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 IL23RQ5VWK5 629 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 LPCAT4Q643R3 524 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 TTC23LQ6PF05 361 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 RASGRP3Q8IV61 690 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 MINDY1Q8N5J2 469 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 LILRA3Q8N6C8 439 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 MCOLN3Q8TDD5 553 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 LRRC58Q96CX6 371 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 ZNF184Q99676 751 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 GMPR2Q9P2T1 348 aaKnown RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 HCN2Q9UL51 889 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 ZNF490Q9ULM2 529 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 PSMD13Q9UNM6 376 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 XIRP2A4UGR9 3374 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 K7ESM1 405 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 QSOX1O00391 747 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 MANBAO00462 879 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 RECQL5O94762 991 aaPredicted RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 WDR47O94967 919 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 CLDN9O95484 217 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 SLC6A12P48065 614 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 HNMTP50135 292 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 HMGCS1Q01581 520 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 ELP6Q0PNE2 266 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 ABRQ12979 859 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 LRRC36Q1X8D7 754 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 TMEM220Q6QAJ8 160 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 LRRC70Q7Z2Q7 622 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 CYP2U1Q7Z449 544 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 SPATA24Q86W54 205 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 MMAAQ8IVH4 418 aaKnown RBP17.94■□□□□ 0.46
CCDC43-201ENST00000315286 CPA6Q8N4T0 437 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 PPP3R2Q96LZ3 170 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 ACTL8Q9H568 366 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 ACTR8Q9H981 624 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 GID8Q9NWU2 228 aa17.94■□□□□ 0.46
CCDC43-201ENST00000315286 FAM234BA2RU67 622 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 PABPN1LA6NDY0 278 aaKnown RBP17.93■□□□□ 0.46
CCDC43-201ENST00000315286 CCDC154A6NI56 674 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 NME4O00746 187 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 RGS14O43566 566 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 MMP20O60882 483 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 ATG13O75143 517 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 SLC2A4P14672 509 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 PREPP48147 710 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 PRLHRP49683 370 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 CPSF6Q16630 551 aaKnown RBP eCLIP17.93■□□□□ 0.46
CCDC43-201ENST00000315286 PAGE3Q5JUK9 113 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 NEK5Q6P3R8 708 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 CYP20A1Q6UW02 462 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 IZUMO2Q6UXV1 221 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 TRIM46Q7Z4K8 759 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 SLC15A3Q8IY34 581 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 SUSD6Q92537 303 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 CHFRQ96EP1 664 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 CCM2Q9BSQ5 444 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 POLR3HQ9Y535 204 aaPredicted RBP17.93■□□□□ 0.46
CCDC43-201ENST00000315286 SZT2Q5T011 3432 aa17.93■□□□□ 0.46
CCDC43-201ENST00000315286 SLC28A1O00337 649 aa17.92■□□□□ 0.46
CCDC43-201ENST00000315286 DNAJA2O60884 412 aa17.92■□□□□ 0.46
CCDC43-201ENST00000315286 C6P13671 934 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms