RNA–Protein interactions for RNA: ENST00000314595.5

POLR2B-201, Transcript of RNA polymerase II subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2B, Length 3,748 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-201ENST00000314595 CCDC177Q9NQR7 707 aaPredicted RBP4.12□□□□□ -1.75
POLR2B-201ENST00000314595 POLR3BQ9NW08 1133 aaPredicted RBP4.12□□□□□ -1.75
POLR2B-201ENST00000314595 TAS2R7Q9NYW3 318 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 ASIC3Q9UHC3 531 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 FZD4Q9ULV1 537 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 TLR6Q9Y2C9 796 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.12□□□□□ -1.75
POLR2B-201ENST00000314595 PCDHB5Q9Y5E4 795 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 SNX11Q9Y5W9 270 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 STYXL1Q9Y6J8 313 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 PTPRQQ9UMZ3 2332 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 AKAP9Q99996 3911 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 LAMA1P25391 3075 aa4.12□□□□□ -1.75
POLR2B-201ENST00000314595 HEATR9A2RTY3 570 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 BLACEA4D250 179 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SLC35F4A4IF30 521 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 CAPN5O15484 640 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 H2AFYO75367 372 aaKnown RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 BANF1O75531 89 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SLITRK5O94991 958 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 HPRP00739 348 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 ENO2P09104 434 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 ZSCAN5DPP0CG00 497 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 HSD17B1P14061 328 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SPNP16150 400 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 CCNA2P20248 432 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 HTR3AP46098 478 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 PPP5CP53041 499 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 NXPH1P58417 271 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 GNG2P59768 71 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 MYL7Q01449 175 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 KDSRQ06136 332 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 CEP78Q5JTW2 689 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 NAPRTQ6XQN6 538 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 CYHR1Q6ZMK1 362 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 FKBP9P1Q75LS8 142 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 GPIHBP1Q8IV16 184 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 NATD1Q8N6N6 113 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 OR10T2Q8NGX3 314 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 FNIP1Q8TF40 1166 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 CPXM1Q96SM3 734 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SLC39A3Q9BRY0 314 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 LHPPQ9H008 270 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 RUBCNLQ9H714 662 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 FSCN3Q9NQT6 498 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 RBAKQ9NYW8 714 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 USE1Q9NZ43 259 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 UBA2Q9UBT2 640 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 FAF1Q9UNN5 650 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 PCDHGA3Q9Y5H0 932 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 RNF215Q9Y6U7 377 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 TMEM150BA6NC51 233 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 GABRDO14764 452 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 LATO43561 262 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 RECKO95980 971 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SERPINE1P05121 402 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 H2AFB1P0C5Y9 115 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 H2AFB2P0C5Z0 115 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 FAM157BP0CG42 384 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 ATP6V1B1P15313 513 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 PRKACBP22694 351 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 HTR1BP28222 390 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 GMPRP36959 345 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 DCTP40126 519 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 PNPLA4P41247 253 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SLC1A6P48664 564 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 PLA2G16P53816 162 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 YWHAGP61981 247 aaKnown RBP eCLIP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 OGDHQ02218 1023 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 TLE1Q04724 770 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 PRKCDQ05655 676 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 ALCAMQ13740 583 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 MESDQ14696 234 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 MFSD13AQ14CX5 517 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 TBR1Q16650 682 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SLC9B1Q4ZJI4 515 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 COQ5Q5HYK3 327 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 C1QL3Q5VWW1 255 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 TIGD3Q6B0B8 471 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 NXNQ6DKJ4 435 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SEZ6L2Q6UXD5 910 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 C14orf80Q86SX3 495 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 C12orf40Q86WS4 652 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 CLVS1Q8IUQ0 354 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 ARMC8Q8IUR7 673 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 FRMD1Q8N878 549 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 OR2I1PQ8NGU4 316 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 HMGB4Q8WW32 186 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 REPS1Q96D71 796 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 CDK5RAP3Q96JB5 506 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 ZNF668Q96K58 619 aaPredicted RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 RDH12Q96NR8 316 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SERPINI1Q99574 410 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 MRPL4Q9BYD3 311 aaKnown RBP4.11□□□□□ -1.75
POLR2B-201ENST00000314595 DNAI2Q9GZS0 605 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 DPEP3Q9H4B8 488 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 TCF7L2Q9NQB0 619 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 SLCO3A1Q9UIG8 710 aa4.11□□□□□ -1.75
POLR2B-201ENST00000314595 NUP50Q9UKX7 468 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms