RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 CCR10P46092 362 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 SEMA3BQ13214 749 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 ATP13A5Q4VNC0 1218 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 TMEM240Q5SV17 173 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 ARRDC2Q8TBH0 407 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 SPACA7Q96KW9 195 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 EFCAB11Q9BUY7 163 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CWH43Q9H720 699 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 IL17CQ9P0M4 197 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CORO2BQ9UQ03 480 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 LOXHD1Q8IVV2 1947 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 TRIM43BA6NCK2 446 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 A8MUI8 341 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 FAM220BPB1ANY3 271 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 LOC730098B7Z3J9 87 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 AP2A2O94973 939 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 OAS1P00973 400 aaKnown RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 PRSS56P0CW18 603 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CTSOP43234 321 aaPredicted RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 RGRP47804 291 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 MAPK12P53778 367 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 TECRLQ5HYJ1 363 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 TJAP1Q5JTD0 557 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 AGTRAPQ6RW13 159 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CCDC81Q6ZN84 652 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 LPGAT1Q92604 370 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 TRIM43Q96BQ3 446 aaPredicted RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 CLIP3Q96DZ5 547 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 DENND2DQ9H6A0 471 aaPredicted RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 MKS1Q9NXB0 559 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 AURKAO14965 403 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 B4GALT3O60512 393 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 ARSAP15289 507 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CDH3P22223 829 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CLCN4P51793 760 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CDKN2DP55273 166 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 MRPL58Q14197 206 aaKnown RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 FAM174BQ3ZCQ3 159 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 AAGABQ6PD74 315 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 LPCAT2Q7L5N7 544 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 ANKRD46Q86W74 232 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 OR4F6Q8NGB9 312 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 AKAP7Q9P0M2 348 aaPredicted RBP13.41□□□□□ -0.26
DDX54-202ENST00000314045 PDP2Q9P2J9 529 aa13.41□□□□□ -0.26
DDX54-202ENST00000314045 CNTRLQ7Z7A1 2325 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 A0A0U1RQS6 177 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 PIPSLA2A3N6 862 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 MATN2O00339 956 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 SMNDC1O75940 238 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX54-202ENST00000314045 ATP6V1C1P21283 382 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 SPINT3P49223 89 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 IL5RAQ01344 420 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 SLC30A9Q6PML9 568 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 ARNT2Q9HBZ2 717 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 RPS6KB2Q9UBS0 482 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 ZNF780BQ9Y6R6 833 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 H3BQ06 376 aaPredicted RBP13.4□□□□□ -0.26
DDX54-202ENST00000314045 STX16-NPEPL1H3BU86 382 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 STX16O14662 325 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 HMGA1P17096 107 aaKnown RBP13.4□□□□□ -0.26
DDX54-202ENST00000314045 PLA2G16P53816 162 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 SLBPQ14493 270 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX54-202ENST00000314045 ZNF789Q5FWF6 425 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 C9orf64Q5T6V5 341 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 FRG2Q64ET8 278 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 REP15Q6BDI9 236 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 CRTC1Q6UUV9 634 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 TRAM1L1Q8N609 369 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 OR4A15Q8NGL6 344 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 PNPT1Q8TCS8 783 aaKnown RBP13.4□□□□□ -0.26
DDX54-202ENST00000314045 SHDQ96IW2 340 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 FRG2BQ96QU4 278 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 RAB23Q9ULC3 237 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 TSPAN6O43657 245 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 CD1DP15813 335 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 ACRV1P26436 265 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 HOXD9P28356 352 aaPredicted RBP13.4□□□□□ -0.26
DDX54-202ENST00000314045 BDKRB1P46663 353 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 RXRGP48443 463 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 AGTR2P50052 363 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 SLC16A1P53985 500 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 TNK2Q07912 1038 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 ZNF678Q5SXM1 525 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 FRMD7Q6ZUT3 714 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 LRRC70Q7Z2Q7 622 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 TERB1Q8NA31 727 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 MCMBPQ9BTE3 642 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 ANGPT4Q9Y264 503 aa13.4□□□□□ -0.26
DDX54-202ENST00000314045 MRPS33Q9Y291 106 aaKnown RBP13.4□□□□□ -0.26
DDX54-202ENST00000314045 KMOO15229 486 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 SLC6A2P23975 617 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 PGFP49763 221 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 DNAJB13P59910 316 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 PRAMEF14Q5SWL7 426 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 PRAMEF13Q5VWM6 474 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 GLYATQ6IB77 296 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 SPESP1Q6UW49 350 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 HEATR4Q86WZ0 1026 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 GPR135Q8IZ08 494 aa13.39□□□□□ -0.27
DDX54-202ENST00000314045 MAGEE2Q8TD90 523 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms