RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 TAS2R42Q7RTR8 314 aa13.59□□□□□ -0.23
MKS1-201ENST00000313863 RBM23Q86U06 439 aaKnown RBP13.59□□□□□ -0.23
MKS1-201ENST00000313863 DCP2Q8IU60 420 aaKnown RBP13.59□□□□□ -0.23
MKS1-201ENST00000313863 PIANPQ8IYJ0 282 aa13.59□□□□□ -0.23
MKS1-201ENST00000313863 FAM86B1Q8N7N1 296 aa13.59□□□□□ -0.23
MKS1-201ENST00000313863 DCBLD1Q8N8Z6 715 aa13.59□□□□□ -0.23
MKS1-201ENST00000313863 LPCAT1Q8NF37 534 aa13.59□□□□□ -0.23
MKS1-201ENST00000313863 MCOLN3Q8TDD5 553 aa13.59□□□□□ -0.23
MKS1-201ENST00000313863 PHF10Q8WUB8 498 aaKnown RBP13.59□□□□□ -0.23
MKS1-201ENST00000313863 FAM120BQ96EK7 910 aaKnown RBP13.59□□□□□ -0.23
MKS1-201ENST00000313863 REXO5Q96IC2 774 aaKnown RBP13.59□□□□□ -0.23
MKS1-201ENST00000313863 APOL4Q9BPW4 351 aa13.59□□□□□ -0.23
MKS1-201ENST00000313863 CARS2Q9HA77 564 aaKnown RBP13.59□□□□□ -0.23
MKS1-201ENST00000313863 SARS2Q9NP81 518 aaKnown RBP13.59□□□□□ -0.23
MKS1-201ENST00000313863 ASB1Q9Y576 335 aa13.59□□□□□ -0.23
MKS1-201ENST00000313863 TMEM189-UBE2V1I3L0A0 370 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 FFAR2O15552 330 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 KDM1AO60341 852 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 PGRP06401 933 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 CNPP09543 421 aaKnown RBP13.58□□□□□ -0.24
MKS1-201ENST00000313863 AGXTP21549 392 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 IGFBP5P24593 272 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 ST13P50502 369 aaKnown RBP13.58□□□□□ -0.24
MKS1-201ENST00000313863 CLCN7P51798 805 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 IST1P53990 364 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 CDH4P55283 916 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 EMX1Q04741 257 aaPredicted RBP13.58□□□□□ -0.24
MKS1-201ENST00000313863 CACNG1Q06432 222 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 TRAF3Q13114 568 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 KEAP1Q14145 624 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 CCDC92Q53HC0 331 aaPredicted RBP13.58□□□□□ -0.24
MKS1-201ENST00000313863 LDLRAP1Q5SW96 308 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 AGAP7PQ5VUJ5 663 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 TMEM132CQ8N3T6 1108 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 FAR1Q8WVX9 515 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 SGCDQ92629 289 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 GLMNQ92990 594 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 PYURFQ96I23 114 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 CDK5RAP1Q96SZ6 601 aaKnown RBP13.58□□□□□ -0.24
MKS1-201ENST00000313863 ADAM2Q99965 735 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 FAM126AQ9BYI3 521 aaPredicted RBP13.58□□□□□ -0.24
MKS1-201ENST00000313863 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.58□□□□□ -0.24
MKS1-201ENST00000313863 RMND5AQ9H871 391 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 SPC25Q9HBM1 224 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 INTS6Q9UL03 887 aaKnown RBP13.58□□□□□ -0.24
MKS1-201ENST00000313863 CCL27Q9Y4X3 112 aa13.58□□□□□ -0.24
MKS1-201ENST00000313863 PRMT5O14744 637 aaPredicted RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 OR1I1O60431 355 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 XYLBO75191 536 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 NADKO95544 446 aaPredicted RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 TBX18O95935 607 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 AKR1A1P14550 325 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 CR2P20023 1033 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 GPR15P49685 360 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 CDKN1CP49918 316 aaPredicted RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 PLIN5Q00G26 463 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 PRSS48Q7RTY5 328 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 P2RY8Q86VZ1 359 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 ELMOD1Q8N336 334 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 RHBDF1Q96CC6 855 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 OR52E6Q96RD3 313 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 SPON2Q9BUD6 331 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 ASPSCR1Q9BZE9 553 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 P2RY12Q9H244 342 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 CLMPQ9H6B4 373 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 C1orf109Q9NX04 203 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 TRPS1Q9UHF7 1281 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 AGO1Q9UL18 857 aaKnown RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 SAMD4AQ9UPU9 718 aaKnown RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 RAI2Q9Y5P3 530 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 A0A096LPI6 279 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 ANKRD66B4E2M5 251 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 DUSP11O75319 330 aaKnown RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 ULK1O75385 1050 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 GRK4P32298 578 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 PIK3CGP48736 1102 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 INAQ16352 499 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 BCL2A1Q16548 175 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 NADSYN1Q6IA69 706 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 LAIR2Q6ISS4 152 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 SBSNQ6UWP8 590 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 TRIM46Q7Z4K8 759 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 CALHM3Q86XJ0 350 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 LIX1Q8N485 282 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 SCAIQ8N9R8 606 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 YIPF6Q96EC8 236 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 ITCHQ96J02 903 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 SLC29A3Q9BZD2 475 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 KCNH6Q9H252 994 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 DUSP21Q9H596 190 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 KAT8Q9H7Z6 458 aaKnown RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 LRTM1Q9HBL6 345 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 OPTCQ9UBM4 332 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 TMEFF2Q9UIK5 374 aaPredicted RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 PKP3Q9Y446 797 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 OARD1Q9Y530 152 aa13.57□□□□□ -0.24
MKS1-201ENST00000313863 GPC6Q9Y625 555 aaPredicted RBP13.57□□□□□ -0.24
MKS1-201ENST00000313863 TMEM247A6NEH6 219 aa13.56□□□□□ -0.24
MKS1-201ENST00000313863 WNT9AO14904 365 aa13.56□□□□□ -0.24
MKS1-201ENST00000313863 SERPINA1P01009 418 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms