RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 ALG5Q9Y673 324 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 M0QX08 132 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 C1RP00736 705 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 CST3P01034 146 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 ESR1P03372 595 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 ERVK-8P63133 956 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 ATXN7L2Q5T6C5 722 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 PDE12Q6L8Q7 609 aaKnown RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF572Q7Z3I7 529 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 SLC22A16Q86VW1 577 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 GPR152Q8TDT2 470 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 HSPBAP1Q96EW2 488 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 RGS17Q9UGC6 210 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 C5orf51A6NDU8 294 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 MC1RQ01726 317 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 FBXO43Q4G163 708 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 C4orf46Q504U0 113 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 PRAMEF17Q5VTA0 474 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 ASB18Q6ZVZ8 466 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 C2orf73Q8N5S3 287 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 LSM14AQ8ND56 463 aaKnown RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 CCDC177Q9NQR7 707 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 NKX1-2Q9UD57 310 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 KMOO15229 486 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 TPST2O60704 377 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 TUBA1BP68363 451 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 MAB21L1Q13394 359 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 MOGQ16653 247 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 SMU1Q2TAY7 513 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 ZNF829Q3KNS6 432 aaPredicted RBP13.47□□□□□ -0.25
CLCN6-201ENST00000312413 TUBA1AQ71U36 451 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 CPNE9Q8IYJ1 553 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 SPPL2BQ8TCT7 592 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 ACOT12Q8WYK0 555 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 IRGQQ8WZA9 623 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 ITPAQ9BY32 194 aa13.47□□□□□ -0.25
CLCN6-201ENST00000312413 A0A1W2PQ67 120 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 ISPDA4D126 451 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 PRAMEF12O95522 483 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 MYCLP1P12525 358 aaPredicted RBP13.46□□□□□ -0.25
CLCN6-201ENST00000312413 KELP23276 732 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 PBX3P40426 434 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 CLCN4P51793 760 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 FUT2Q10981 343 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 KLHL35Q6PF15 583 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 HID1Q8IV36 788 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 KLHL36Q8N4N3 616 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 ZDHHC18Q9NUE0 388 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 MARK1Q9P0L2 795 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 EVLQ9UI08 416 aaPredicted RBP13.46□□□□□ -0.25
CLCN6-201ENST00000312413 TECPR2O15040 1411 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 ZSCAN5BA6NJL1 495 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 GNB5O14775 395 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 GRM6O15303 877 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 RYKP34925 604 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 ATXN1P54253 815 aaKnown RBP13.46□□□□□ -0.25
CLCN6-201ENST00000312413 GDF10P55107 478 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 TAF10Q12962 218 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 NIPAL1Q6NVV3 410 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 PHYKPLQ8IUZ5 450 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 TOMM5Q8N4H5 51 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 IFT27Q9BW83 186 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 PCDHGA11Q9Y5H2 935 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 ARPC2O15144 300 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 MT-CYBP00156 380 aaPredicted RBP13.46□□□□□ -0.25
CLCN6-201ENST00000312413 DNAJA1P31689 397 aaKnown RBP13.46□□□□□ -0.25
CLCN6-201ENST00000312413 TMEM198Q66K66 360 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 KIAA0930Q6ICG6 404 aaPredicted RBP13.46□□□□□ -0.25
CLCN6-201ENST00000312413 FTHL17Q9BXU8 183 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 FAM105AQ9NUU6 356 aa13.46□□□□□ -0.25
CLCN6-201ENST00000312413 NOCTQ9UK39 431 aaKnown RBP13.46□□□□□ -0.25
CLCN6-201ENST00000312413 PIK3C2BO00750 1634 aa13.46□□□□□ -0.26
CLCN6-201ENST00000312413 MANSC4A6NHS7 340 aaPredicted RBP13.46□□□□□ -0.26
CLCN6-201ENST00000312413 PTGER3P43115 390 aa13.46□□□□□ -0.26
CLCN6-201ENST00000312413 GRSF1Q12849 480 aaKnown RBP eCLIP13.46□□□□□ -0.26
CLCN6-201ENST00000312413 EIF5AL1Q6IS14 154 aaKnown RBP13.46□□□□□ -0.26
CLCN6-201ENST00000312413 PAMR1Q6UXH9 720 aa13.46□□□□□ -0.26
CLCN6-201ENST00000312413 ANKRD23Q86SG2 305 aa13.46□□□□□ -0.26
CLCN6-201ENST00000312413 NDRG1Q92597 394 aaKnown RBP13.46□□□□□ -0.26
CLCN6-201ENST00000312413 GAL3ST3Q96A11 431 aa13.46□□□□□ -0.26
CLCN6-201ENST00000312413 KXD1Q9BQD3 176 aa13.46□□□□□ -0.26
CLCN6-201ENST00000312413 DUSP26Q9BV47 211 aa13.46□□□□□ -0.26
CLCN6-201ENST00000312413 IGSF9Q9P2J2 1179 aa13.46□□□□□ -0.26
CLCN6-201ENST00000312413 MATN4O95460 622 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 SLC18A2Q05940 514 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 PLA2G4EQ3MJ16 856 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 PHC2Q8IXK0 858 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 NKD1Q969G9 470 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 LGR4Q9BXB1 951 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 PHPT1Q9NRX4 125 aaPredicted RBP13.45□□□□□ -0.26
CLCN6-201ENST00000312413 TMEM9Q9P0T7 183 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 PCDHGB7Q9Y5F8 929 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 SLC18A1P54219 525 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 SLC30A8Q8IWU4 369 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 GALNT12Q8IXK2 581 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 SIDT2Q8NBJ9 832 aaKnown RBP13.45□□□□□ -0.26
CLCN6-201ENST00000312413 TMIEQ8NEW7 156 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 C1orf216Q8TAB5 229 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 LRRC58Q96CX6 371 aa13.45□□□□□ -0.26
CLCN6-201ENST00000312413 MYOCQ99972 504 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms