RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 GNA12Q03113 381 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 KCNN1Q92952 543 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 LRRC3Q9BY71 257 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF358Q9NW07 568 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ANXA8P13928 327 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 NUMBP49757 651 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 RGS19P49795 217 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 TAS2R50P59544 299 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 NECAB3Q96P71 396 aaPredicted RBP15.24■□□□□ 0.03
HCFC1-201ENST00000310441 CDH13P55290 713 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 NPNTQ6UXI9 565 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF627Q7L945 461 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 PARP8Q8N3A8 854 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 CCR8P51685 355 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 CRYBB1P53674 252 aaPredicted RBP15.24■□□□□ 0.03
HCFC1-201ENST00000310441 PHC1P78364 1004 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 RAB39AQ14964 217 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 SLC1A5Q15758 541 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 RAB12Q6IQ22 244 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 SMARCD3Q6STE5 483 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 PLD4Q96BZ4 506 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 APOLD1Q96LR9 279 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF285Q96NJ3 590 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 MTMR9Q96QG7 549 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 ARL8BQ9NVJ2 186 aa15.24■□□□□ 0.03
HCFC1-201ENST00000310441 CDK5RAP2Q96SN8 1893 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 CTNNB1P35222 781 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 MCCD1P59942 119 aaPredicted RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 S100A16Q96FQ6 103 aaKnown RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 DPAGT1Q9H3H5 408 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 POFUT2Q9Y2G5 429 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 ATP6AP2O75787 350 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 XKP51811 444 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 SLC13A2Q13183 592 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF517Q6ZMY9 492 aaPredicted RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 ERI1Q8IV48 349 aaKnown RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 NDC1Q9BTX1 674 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 ZBTB11O95625 1053 aaPredicted RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 SMSP52788 366 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 E2F1Q01094 437 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 ARFRP1Q13795 201 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 NTRK3Q16288 839 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 TOMM5Q8N4H5 51 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 PRELID2Q8N945 189 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 TMEM68Q96MH6 324 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 IGFLR1Q9H665 355 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 USP20Q9Y2K6 914 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 CEP170BQ9Y4F5 1589 aaPredicted RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 RNASE12Q5GAN4 147 aaKnown RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 TSPAN1O60635 241 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 C7orf57Q8NEG2 295 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 MIPEPQ99797 713 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 TTPALQ9BTX7 342 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 RANBP3Q9H6Z4 567 aaPredicted RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 TMED5Q9Y3A6 229 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 CDH10Q9Y6N8 788 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 WASF2Q9Y6W5 498 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 NUP205Q92621 2012 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 UBAP2Q5T6F2 1119 aaKnown RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 ZNF717Q9BY31 904 aaPredicted RBP15.23■□□□□ 0.03
HCFC1-201ENST00000310441 GLOD4Q9HC38 313 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 MYNNQ9NPC7 610 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 GTF2IRD1Q9UHL9 959 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 HCAR3P49019 387 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 CAPZA1P52907 286 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 NFKB2Q00653 900 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 GK5Q6ZS86 529 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 GPAT4Q86UL3 456 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 LGMNQ99538 433 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 FUCA2Q9BTY2 467 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 AGXT2Q9BYV1 514 aa15.23■□□□□ 0.03
HCFC1-201ENST00000310441 A0A0G2JMP0 313 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 CAPN8A6NHC0 703 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 GADD45GO95257 159 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 CSTBP04080 98 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 PKMP14618 531 aaKnown RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 OR4M2Q8NGB6 313 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 FAXDC2Q96IV6 333 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 MECRQ9BV79 373 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 LRRC4CQ9HCJ2 640 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 YBEYP58557 167 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 TARDBPQ13148 414 aaKnown RBP eCLIP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 CEP68Q76N32 757 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 ZDHHC21Q8IVQ6 265 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 OSTF1Q92882 214 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 SDHAF3Q9NRP4 125 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 PLGP00747 810 aaPredicted RBP15.22■□□□□ 0.03
HCFC1-201ENST00000310441 PTGER3P43115 390 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 KLF10Q13118 480 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 WSCD2Q2TBF2 565 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 GALNT15Q8N3T1 639 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 BRSK1Q8TDC3 778 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 SHC3Q92529 594 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 NEDD8-MDP1E9PL57 170 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 SLC6A9P48067 706 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 FGL1Q08830 312 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 BAIAP2L2Q6UXY1 529 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 PIGZQ86VD9 579 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 OR5K1Q8NHB7 308 aa15.22■□□□□ 0.03
HCFC1-201ENST00000310441 PPTC7Q8NI37 304 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms