RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 NFE2Q16621 373 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 CCDC14Q49A88 953 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 LIN52Q52LA3 116 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 FASTKD1Q53R41 847 aaKnown RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SPANXN3Q5MJ09 141 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SH2D4BQ5SQS7 431 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 GRTP1Q5TC63 336 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 THEMIS2Q5TEJ8 643 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 AGBL4Q5VU57 503 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ARMC3Q5W041 872 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 OR6B2Q6IFH4 312 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ZFP1Q6P2D0 407 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 OLFML1Q6UWY5 402 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 NPNTQ6UXI9 565 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 IZUMO2Q6UXV1 221 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 PACS1Q6VY07 963 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SCARA5Q6ZMJ2 495 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 FAM183BPQ6ZVS7 135 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF534Q76KX8 674 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SLC26A9Q7LBE3 791 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 STRADAQ7RTN6 431 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 TTC30AQ86WT1 665 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SYT12Q8IV01 421 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SCN4BQ8IWT1 228 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ADGRF2Q8IZF7 708 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 LRRC52Q8N7C0 313 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 PNPLA1Q8N8W4 532 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 RDH11Q8TC12 318 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 DTX3LQ8TDB6 740 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 HMGB4Q8WW32 186 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 IRGQQ8WZA9 623 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 MYLPFQ96A32 169 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 PRR11Q96HE9 360 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 HPDLQ96IR7 371 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 CNDP1Q96KN2 507 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SPATA17Q96L03 361 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SPATA13Q96N96 652 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 LMF1Q96S06 567 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ACOX2Q99424 681 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SERPINI1Q99574 410 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 CPNE1Q99829 537 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 THTPAQ9BU02 230 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SNRNP25Q9BV90 132 aaKnown RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 TTLL2Q9BWV7 592 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SPATA16Q9BXB7 569 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SLC13A1Q9BZW2 595 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 KLHL4Q9C0H6 718 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 BRD8Q9H0E9 1235 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 C12orf65Q9H3J6 166 aaKnown RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 Q9H521 79 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SUDS3Q9H7L9 328 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 C10orf88Q9H8K7 445 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SEC61A2Q9H9S3 476 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 MRM3Q9HC36 420 aaKnown RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 NSMCE4AQ9NXX6 385 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ETAA1Q9NY74 926 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 C6orf203Q9P0P8 240 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ARMCX1Q9P291 453 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 UXTQ9UBK9 157 aaPredicted RBP4.86□□□□□ -1.63
CKS1B-201ENST00000308987 HESX1Q9UBX0 185 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 FBXL7Q9UJT9 491 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 ADAM29Q9UKF5 820 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 DNAJC16Q9Y2G8 782 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SNX9Q9Y5X1 595 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 CPQQ9Y646 472 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 MAD1L1Q9Y6D9 718 aa4.86□□□□□ -1.63
CKS1B-201ENST00000308987 SPENQ96T58 3664 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 IGHV1OR15-9A0A0B4J2B8 117 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TCRBV21S2A2A0A5A6 115 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 WASH3PC4AMC7 463 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 CLDN5O00501 218 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ZNF195O14628 629 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 PSMD3O43242 534 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 MTSS1O43312 755 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 SH3BP5O60239 455 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 HUS1O60921 280 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 CBFA2T3O75081 653 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 AVILO75366 819 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 TULP3O75386 442 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 METTL18O95568 372 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 NFATC1O95644 943 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 PENKP01210 267 aaPredicted RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ALDOAP04075 364 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 POLBP06746 335 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ITGA2BP08514 1039 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 KRT19P08727 400 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 THRAP10827 490 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 RALBP11234 206 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 COL6A2P12110 1019 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 COX4I1P13073 169 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 GP5P40197 560 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 WASP42768 502 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 GLRBP48167 497 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 NDST1P52848 882 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ALDH18A1P54886 795 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 AIF1P55008 147 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 MTTPP55157 894 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 CDH8P55286 799 aa4.85□□□□□ -1.63
CKS1B-201ENST00000308987 ABCE1P61221 599 aaKnown RBP4.85□□□□□ -1.63
CKS1B-201ENST00000308987 RPL10AP62906 217 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms