RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PSMG2Q969U7 264 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 FAM198AQ9UFP1 575 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PRELID1Q9Y255 219 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PLEKHA6Q9Y2H5 1048 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PCDHGA10Q9Y5H3 936 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PCDHGA12O60330 932 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 SPATA31C1P0DKV0 1188 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 HFE2Q6ZVN8 426 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 LRRC70Q7Z2Q7 622 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 RASGEF1AQ8N9B8 481 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 RDH11Q8TC12 318 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 STARD8Q92502 1023 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 GIN1Q9NXP7 522 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 KANSL3Q9P2N6 904 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PDE10AQ9Y233 779 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 MYH7P12883 1935 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 FAM86C2PA6NEL3 165 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 CXorf49A8MYA2 514 aaPredicted RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 IRF6O14896 467 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 FSCN2O14926 492 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 LINGO3P0C6S8 592 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 ALPPL2P10696 532 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 ID2Q02363 134 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PPIL2Q13356 520 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 WSCD2Q2TBF2 565 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 AUTS2Q8WXX7 1259 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 HIPK3Q9H422 1215 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 ACSS3Q9H6R3 686 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 KCTD5Q9NXV2 234 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 FKBPLQ9UIM3 349 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 ADAMTS3O15072 1205 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 PROM1O43490 865 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 GJA1P17302 382 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 EDNRAP25101 427 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 GMPRP36959 345 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 ACSBG2Q5FVE4 666 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 DNAAF2Q9NVR5 837 aaKnown RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 MAGEL2Q9UJ55 1249 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 TBX18O95935 607 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 OR1E2P47887 323 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 ANXA8L1Q5VT79 327 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 APOBEC3HQ6NTF7 200 aaKnown RBP12.45□□□□□ -0.42
USP38-201ENST00000307017 ZYG11AQ6WRX3 759 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 ANKRD52Q8NB46 1076 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 SLC44A1Q8WWI5 657 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 QRFPRQ96P65 431 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 TRIM2Q9C040 744 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 TAS2R1Q9NYW7 299 aa12.45□□□□□ -0.42
USP38-201ENST00000307017 DHX15O43143 795 aaKnown RBP12.44□□□□□ -0.42
USP38-201ENST00000307017 TNFRSF8P28908 595 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 FOXN2P32314 431 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 SPAM1P38567 509 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 FAM180BQ6P0A1 224 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 CPNE2Q96FN4 548 aaPredicted RBP12.44□□□□□ -0.42
USP38-201ENST00000307017 HMGXB4Q9UGU5 601 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 RIIAD1A6NNX1 92 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 EPHX1P07099 455 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 ACVR2AP27037 513 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 SLC1A2P43004 574 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 ZCCHC12Q6PEW1 402 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 AGBL3Q8NEM8 1001 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 OR13C4Q8NGS5 318 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 SACM1LQ9NTJ5 587 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 CORO2BQ9UQ03 480 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 RPP40O75818 363 aaKnown RBP12.44□□□□□ -0.42
USP38-201ENST00000307017 RB1P06400 928 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 ENDOUP21128 410 aaKnown RBP12.44□□□□□ -0.42
USP38-201ENST00000307017 RPL10P27635 214 aaKnown RBP12.44□□□□□ -0.42
USP38-201ENST00000307017 ADH7P40394 386 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 MAP2K4P45985 399 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 NFATC2Q13469 925 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 MSANTD2Q6P1R3 559 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 SLC2A7Q6PXP3 512 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 PRSS55Q6UWB4 352 aaPredicted RBP12.44□□□□□ -0.42
USP38-201ENST00000307017 XKR5Q6UX68 686 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 ARCQ7LC44 396 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 SERPINA9Q86WD7 417 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 CCDC54Q8NEL0 328 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 OR2L8Q8NGY9 312 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 C14orf119Q9NWQ9 140 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 GLOD5A6NK44 160 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 TGFB1I1O43294 461 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 XYLBO75191 536 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 CLDN9O95484 217 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 CCNE2O96020 404 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 FGBP02675 491 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 IL12BP29460 328 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 NCBP2P52298 156 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP38-201ENST00000307017 XIAPP98170 497 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 TUSC3Q13454 348 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 MEP1AQ16819 746 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 CHST9Q7L1S5 443 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 C17orf64Q86WR6 236 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 CASTOR1Q8WTX7 329 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 DNAJA4Q8WW22 397 aaPredicted RBP12.44□□□□□ -0.42
USP38-201ENST00000307017 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
USP38-201ENST00000307017 ZNF878C9JN71 531 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 PLATP00750 562 aa12.44□□□□□ -0.42
USP38-201ENST00000307017 ACADLP28330 430 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms