RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 CDH12P55289 794 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 IFI44LQ53G44 452 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 PIK3R6Q5UE93 754 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 METTL21AQ8WXB1 218 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 AUTS2Q8WXX7 1259 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 NPY6RQ99463 290 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ELL3Q9HB65 397 aaPredicted RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 MCM8Q9UJA3 840 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ECI2O75521 394 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ALPIP09923 528 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 AKT2P31751 481 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 KCNQ1P51787 676 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 NFKB2Q00653 900 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 FPGSQ05932 587 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ZBTB46Q86UZ6 589 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ZZZ3Q8IYH5 903 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 CADM2Q8N3J6 435 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 OR2AP1Q8NGE2 309 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ZCCHC10Q8TBK6 192 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 RBM18Q96H35 190 aaKnown RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 COX4I2Q96KJ9 171 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 FCRL4Q96PJ5 515 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 MRPS17Q9Y2R5 130 aaKnown RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 TEX264Q9Y6I9 313 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 KHDRBS3O75525 346 aaKnown RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 PRKAR1AP10644 381 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 GPR17Q13304 367 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ARSIQ5FYB1 569 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 BRAT1Q6PJG6 821 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ZDHHC21Q8IVQ6 265 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 TTC29Q8NA56 475 aaPredicted RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 ZBED6CLQ96FA7 236 aaPredicted RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 C5orf34Q96MH7 638 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 MTERF1Q99551 399 aaKnown RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 C11orf49Q9H6J7 331 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 POLMQ9NP87 494 aaPredicted RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 NDRG2Q9UN36 371 aaKnown RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 INSL6Q9Y581 213 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 TLL2Q9Y6L7 1015 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 TTC24A2A3L6 582 aaPredicted RBP15.66■□□□□ 0.1
USP42-201ENST00000306177 MTPNP58546 118 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 GPX6P59796 221 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 TRIM32Q13049 653 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 LYSMD3Q7Z3D4 306 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 PIGXQ8TBF5 258 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 ZSCAN5AQ9BUG6 496 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 USP29Q9HBJ7 922 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 MAP10Q9P2G4 905 aa15.66■□□□□ 0.1
USP42-201ENST00000306177 hCG_2039718K7EN88 272 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 PRKCGP05129 697 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 RAP2AP10114 183 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 LPIN1Q14693 890 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 TXNDC8Q6A555 127 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 LIN54Q6MZP7 749 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 RANBP3LQ86VV4 465 aaPredicted RBP15.65■□□□□ 0.1
USP42-201ENST00000306177 ZC3HC1Q86WB0 502 aaKnown RBP15.65■□□□□ 0.1
USP42-201ENST00000306177 DDX1Q92499 740 aaKnown RBP15.65■□□□□ 0.1
USP42-201ENST00000306177 BORCS5Q969J3 196 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 BORCS6Q96GS4 357 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 SLC35G5Q96KT7 338 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 TMEM209Q96SK2 561 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 CYP2S1Q96SQ9 504 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 XKRYO14609 159 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 SSNA1O43805 119 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 NDUFA5Q16718 116 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 AHI1Q8N157 1196 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 COQ7Q99807 217 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 C16orf70Q9BSU1 422 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 LRRC3Q9BY71 257 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 MRPS30Q9NP92 439 aaKnown RBP15.65■□□□□ 0.1
USP42-201ENST00000306177 ITM2CQ9NQX7 267 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 ADAMTSL3P82987 1691 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 ALDH4A1P30038 563 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 PLA2G16P53816 162 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 ADGRE1Q14246 886 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 PDGFRLQ15198 375 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 HKDC1Q2TB90 917 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 TCEAL5Q5H9L2 206 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 PITRM1Q5JRX3 1037 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 HID1Q8IV36 788 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 RIOK2Q9BVS4 552 aaKnown RBP15.65■□□□□ 0.1
USP42-201ENST00000306177 KLHL31Q9H511 634 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 TESMINQ9Y4I5 508 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 RIIAD1A6NNX1 92 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 ITM2AO43736 263 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 RGS20O76081 388 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 BNC1Q01954 994 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 MINDY4Q4G0A6 757 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 GPR65Q8IYL9 337 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 ZMIZ2Q8NF64 920 aa15.65■□□□□ 0.1
USP42-201ENST00000306177 RHPN2P1A8MT19 583 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 PIRO00625 290 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 B3GALT2O43825 422 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 PCDH7O60245 1069 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 DNAJB1P25685 340 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 PSMA1P25786 263 aaKnown RBP15.64■□□□□ 0.1
USP42-201ENST00000306177 KHKP50053 298 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 C1QTNF8P60827 252 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 GLIS1Q8NBF1 620 aa15.64■□□□□ 0.1
USP42-201ENST00000306177 EFCAB11Q9BUY7 163 aa15.64■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms