RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 TRIM39Q9HCM9 518 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 FAM207AQ9NSI2 230 aaPredicted RBP5.71□□□□□ -1.49
ZNF440-201ENST00000304060 IMP3Q9NV31 184 aaKnown RBP5.71□□□□□ -1.49
ZNF440-201ENST00000304060 ASF1BQ9NVP2 202 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 GPATCH2LQ9NWQ4 482 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 TAB2Q9NYJ8 693 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 SEC14L3Q9UDX4 400 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 RWDD2AQ9UIY3 292 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 AP4E1Q9UPM8 1137 aa5.71□□□□□ -1.49
ZNF440-201ENST00000304060 MYLKQ15746 1914 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 C1orf232A0A0U1RR37 186 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 MEN1O00255 615 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 NDUFAB1O14561 156 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 PPM1DO15297 605 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 KCNN4O15554 427 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CELA2BP08218 269 aaPredicted RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 SNRPB2P08579 225 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 ZNF7P17097 686 aaPredicted RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 NDUFA8P51970 172 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 PDX1P52945 283 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 POLR2FP61218 127 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 MRPL49Q13405 166 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 PYCR3Q53H96 274 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 ZC3H12BQ5HYM0 836 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 ANKRD20A2Q5SQ80 823 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 ANKRD20A1Q5TYW2 823 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 ANKRD20A3Q5VUR7 823 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 THOC7Q6I9Y2 204 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 C16orf87Q6PH81 154 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 FAM92BQ6ZTR7 304 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CCNYQ8ND76 341 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 LPCAT1Q8NF37 534 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CA5BP1Q8WTZ4 195 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 SCRN2Q96FV2 425 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 PSKH2Q96QS6 385 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 RIOK2Q9BVS4 552 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 VCX3BQ9H321 246 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 VCX3AQ9NNX9 186 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 PAIP2BQ9ULR5 123 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 A0A1W2PQJ5 194 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CTAGE15A4D2H0 777 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 WASH4PA8MWX3 477 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 C2orf74A8MZ97 194 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CEACAM5P06731 702 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 ANXA5P08758 320 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CTAGE8P0CG41 777 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 NR1D1P20393 614 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 DCDP81605 110 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CHAF1BQ13112 559 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 TFDP2Q14188 446 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 NDUFA5Q16718 116 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 SMUG1Q53HV7 270 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 C1orf220Q5T0J3 134 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 SEL1L2Q5TEA6 688 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 MEX3BQ6ZN04 569 aaKnown RBP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CTAGE6Q86UF2 777 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CTAGE4Q8IX94 777 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.71□□□□□ -1.5
ZNF440-201ENST00000304060 NAGSQ8N159 534 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 UBL4BQ8N7F7 174 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 ANKS4BQ8N8V4 417 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 TMEM178AQ8NBL3 297 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 FAR1Q8WVX9 515 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 SDCCAG3Q96C92 435 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 LMF1Q96S06 567 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 TRABDQ9H4I3 376 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 PARVAQ9NVD7 372 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 RIC8BQ9NVN3 520 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 TCFL5Q9UL49 500 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 CNTN6Q9UQ52 1028 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 RP1P56715 2156 aa5.71□□□□□ -1.5
ZNF440-201ENST00000304060 NDC80O14777 642 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 OR2B3O76000 313 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 SLC4A1P02730 911 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 ALOX15P16050 662 aaPredicted RBP5.7□□□□□ -1.5
ZNF440-201ENST00000304060 POLD2P49005 469 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 ART1P52961 327 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 TLE4Q04727 773 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 TMED2Q15363 201 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 CCDC153Q494R4 210 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 AGBL2Q5U5Z8 902 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 ZNF761Q86XN6 746 aaPredicted RBP5.7□□□□□ -1.5
ZNF440-201ENST00000304060 AGAP11Q8TF27 550 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 SLC22A18Q96BI1 424 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 MTFMTQ96DP5 389 aaKnown RBP5.7□□□□□ -1.5
ZNF440-201ENST00000304060 TMEM237Q96Q45 408 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 NR1H4Q96RI1 486 aaPredicted RBP5.7□□□□□ -1.5
ZNF440-201ENST00000304060 RAB33BQ9H082 229 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 CHST8Q9H2A9 424 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 CENPHQ9H3R5 247 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 C1GALT1Q9NS00 363 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 L3MBTL1Q9Y468 752 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 PMS2P1A4D2B8 440 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 FAM25EA8MYX2 175 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 SEMA7AO75326 666 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 H2AFZP0C0S5 128 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 CD46P15529 392 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 AGAP20933 346 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 PAFAH1B1P43034 410 aa5.7□□□□□ -1.5
ZNF440-201ENST00000304060 EMP3P54852 163 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms