RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 DPYSL2Q16555 572 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 WSCD2Q2TBF2 565 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 C9orf64Q5T6V5 341 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PNLDC1Q8NA58 520 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PCDHB18PQ96TA0 734 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 FBXO9Q9UK97 447 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PACSIN3Q9UKS6 424 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PCDHB9Q9Y5E1 797 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 C10orf71Q711Q0 1435 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 WNT10BO00744 389 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ACVR2AP27037 513 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 DCDC1P59894 354 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 KCTD19Q17RG1 926 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 KLHL26Q53HC5 615 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 DACT2Q5SW24 774 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CLEC6AQ6EIG7 209 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 RFWD3Q6PCD5 774 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 SYVN1Q86TM6 617 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PARP8Q8N3A8 854 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF615Q8N8J6 731 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 RHBGQ9H310 441 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 RANBP3Q9H6Z4 567 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ABCB9Q9NP78 766 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ACP6Q9NPH0 428 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 TBC1D3BA6NDS4 549 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 H3BM21 787 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PPEF2O14830 753 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PIP5K1BO14986 540 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CDC40O60508 579 aaKnown RBP eCLIP7.52□□□□□ -1.212e-6■□□□□ 10.6
SF3B3-201ENST00000302516 IMPDH1P20839 514 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CMPK1P30085 196 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 APLP1P51693 650 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 CRISP3P54108 245 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 TOMM20Q15388 145 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF829Q3KNS6 432 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ACSBG2Q5FVE4 666 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 IDNKQ5T6J7 187 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 PRAMEF18Q5VWM3 479 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 IRF2BP1Q8IU81 584 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 MAPKAP1Q9BPZ7 522 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 SPATA9Q9BWV2 254 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 DPAGT1Q9H3H5 408 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 TCF7L1Q9HCS4 588 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 GPN3Q9UHW5 284 aaPredicted RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 SPEF1Q9Y4P9 236 aa7.52□□□□□ -1.21
SF3B3-201ENST00000302516 RBM7Q9Y580 266 aaKnown RBP7.52□□□□□ -1.21
SF3B3-201ENST00000302516 ILVBLA1L0T0 632 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SLC19A2O60779 497 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 RBMXL2O75526 392 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ERAL1O75616 437 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 GADD45GO95257 159 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 HPRP00739 348 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 HDCP19113 662 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 F8A1P23610 371 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CLCN4P51793 760 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 PDX1P52945 283 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 GABARAPL2P60520 117 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 RPP38P78345 283 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CNTN2Q02246 1040 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 EN1Q05925 392 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SIM2Q14190 667 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ABCA11PQ4W5N1 156 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 OR10A6Q8NH74 314 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF599Q96NL3 588 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 FZD10Q9ULW2 581 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 N6AMT1Q9Y5N5 214 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 A0A1B0GVM2 712 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TCAF2A6NFQ2 919 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 C4BPAP04003 597 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SNHG28P0DPA3 235 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 COL6A1P12109 1028 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 RPIAP49247 311 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 GBX2P52951 348 aaPredicted RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CYP4F8P98187 520 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 FUT2Q10981 343 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 RALGPS1Q5JS13 557 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TSTD2Q5T7W7 516 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TSSK3Q96PN8 268 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 DCSTAMPQ9H295 470 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ACTR3BQ9P1U1 418 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 WASF2Q9Y6W5 498 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 C2CD4BA6NLJ0 364 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CYB5AP00167 134 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 LINGO3P0C6S8 592 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF613Q6PF04 617 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 SCIMPQ6UWF3 145 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 LHFPL3Q86UP9 236 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 AMIGO1Q86WK6 493 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZNF227Q86WZ6 799 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 C12orf29Q8N999 325 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 NXPE2Q96DL1 559 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TTPALQ9BTX7 342 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 ZBTB26Q9HCK0 441 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 INSIG1O15503 277 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 FAM155BO75949 473 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 PRNPP04156 253 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 RB1P06400 928 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 FASTKD3Q14CZ7 662 aaKnown RBP7.51□□□□□ -1.21
SF3B3-201ENST00000302516 TPRG1LQ5T0D9 272 aa7.51□□□□□ -1.21
SF3B3-201ENST00000302516 CYP2U1Q7Z449 544 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms