RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 NCLNQ969V3 563 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 FUBP1Q96AE4 644 aaKnown RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 IMP4Q96G21 291 aaKnown RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 DMRTB1Q96MA1 342 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 SLC25A51Q9H1U9 297 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 NT5MQ9NPB1 228 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 CCDC177Q9NQR7 707 aaPredicted RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ELOVL7A1L3X0 281 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 MYBPHLA2RUH7 354 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ASB14A6NK59 587 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 HHLA1C9JL84 531 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 M0R082 166 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ALX3O95076 343 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 MMP2P08253 660 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 CXCR4P61073 352 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 MRPS15P82914 257 aaKnown RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 GALK2Q01415 458 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 MAD2L1BPQ15013 274 aaPredicted RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 KIAA0040Q15053 153 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 CDK10Q15131 360 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 SV2CQ496J9 727 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 SIRPB2Q5JXA9 342 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 CPZQ66K79 652 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 RFPL4BQ6ZWI9 263 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 STAG3L4Q8TBR4 150 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 GIPC2Q8TF65 315 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 SLC38A4Q969I6 547 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 SLC10A4Q96EP9 437 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 PCED1BQ96HM7 432 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 KLHL5Q96PQ7 755 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 AARSD1Q9BTE6 412 aaKnown RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ITPAQ9BY32 194 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 RASSF1Q9NS23 344 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 DCAF13Q9NV06 445 aaKnown RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 MPP6Q9NZW5 540 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 EIF2B4Q9UI10 523 aaKnown RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ARL5AQ9Y689 179 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 PDZK1P1A8MUH7 402 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ARVCFO00192 962 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 GJB3O75712 270 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 SERPINA1P01009 418 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 DNTTP04053 509 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ARL1P40616 181 aaPredicted RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 NRIP1P48552 1158 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 HUNKP57058 714 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 OR2B6P58173 313 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 NRG1Q02297 640 aaPredicted RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 PRKCDQ05655 676 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ARHGAP1Q07960 439 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 PTGR1Q14914 329 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 MANEALQ5VSG8 457 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 LETMD1Q6P1Q0 360 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 GPRIN3Q6ZVF9 776 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 LRRC8DQ7L1W4 858 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 HIPK1Q86Z02 1210 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 AADATQ8N5Z0 425 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 OR13C4Q8NGS5 318 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 GTF2H4Q92759 462 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 ST6GAL2Q96JF0 529 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 SDHCQ99643 169 aaPredicted RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 REXO4Q9GZR2 422 aaKnown RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 NXF2Q9GZY0 626 aaKnown RBP10.68□□□□□ -0.7
ZNF558-201ENST00000301475 OSER1Q9NX31 292 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 PCDHGB6Q9Y5F9 930 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 GMPPBQ9Y5P6 360 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 MAU2Q9Y6X3 613 aa10.68□□□□□ -0.7
ZNF558-201ENST00000301475 NUP214P35658 2090 aaPredicted RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 CD3EAPO15446 510 aaKnown RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 ZW10O43264 779 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 WBP4O75554 376 aaKnown RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 HOXA9P31269 272 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 HOXC13P31276 330 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 CYP2C18P33260 490 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 UGT2B10P36537 528 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 PNPLA4P41247 253 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 ERVPABLB-1P60509 514 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 TUBA1BP68363 451 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 ITKQ08881 620 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 KEAP1Q14145 624 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 MARCH8Q5T0T0 291 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 SHQ1Q6PI26 577 aaKnown RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 TUBA1AQ71U36 451 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 GPR149Q86SP6 731 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 TOP6BLQ8N6T0 577 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 NETO1Q8TDF5 533 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 SLC13A3Q8WWT9 602 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 EMID1Q96A84 441 aaPredicted RBP10.67□□□□□ -0.7
ZNF558-201ENST00000301475 PPP1R2P1Q96PQ5 205 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 TMEM246Q9BRR3 403 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 SLC6A13Q9NSD5 602 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 C14orf119Q9NWQ9 140 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 CDH9Q9ULB4 789 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 RNF6Q9Y252 685 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 CARD8Q9Y2G2 431 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 TTC3P53804 2025 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 UNCXA6NJT0 531 aa10.67□□□□□ -0.7
ZNF558-201ENST00000301475 CCRL2O00421 344 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms