RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 MAP2K5Q13163 448 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 RCAN2Q14206 197 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 VARS2Q5ST30 1063 aaKnown RBP13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 PROSER1Q86XN7 944 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZDHHC21Q8IVQ6 265 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 MFSD2AQ8NA29 543 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 PIK3C3Q8NEB9 887 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 PGAP3Q96FM1 320 aaPredicted RBP13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 MS4A4AQ96JQ5 239 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 EGLN2Q96KS0 407 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 TLR9Q9NR96 1032 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 ABT1Q9ULW3 272 aaKnown RBP13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 GIT1Q9Y2X7 761 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 DOCK3Q8IZD9 2030 aa13.07□□□□□ -0.32
TNFRSF21-201ENST00000296861 A6NL46 340 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 K7ERQ8 282 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 RFXANKO14593 260 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 PER2O15055 1255 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 FFAR2O15552 330 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 ADAM23O75077 832 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 CNOT3O75175 753 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 GJB5O95377 273 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 PRAMEF1O95521 474 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 MMP2P08253 660 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 PBLDP30039 288 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 RPL9P32969 192 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 PPP3CCP48454 512 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 ST13P50502 369 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 CDH18Q13634 790 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 NFE2Q16621 373 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 SPRYD7Q5W111 196 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 MCFD2Q8NI22 146 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 PANX1Q96RD7 426 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZNF225Q9UK10 706 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 RBM47A0AV96 593 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 SMIM30A4D0T7 59 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 LCHNA4D1U4 455 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 KRBA1A5PL33 1030 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 TFECO14948 347 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 INSIG1O15503 277 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 PGRP06401 933 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 HOXD12P35452 270 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 SERPINB10P48595 397 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 RPL34P49207 117 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 SLC11A2P49281 568 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 SERINC3Q13530 473 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 OR4F3Q6IEY1 312 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 PDE12Q6L8Q7 609 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 FAM180BQ6P0A1 224 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 EFL1Q7Z2Z2 1120 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 PACRGLQ8N7B6 248 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 ZNF420Q8TAQ5 688 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 SLC22A17Q8WUG5 538 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 MED8Q96G25 268 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 MTERF1Q99551 399 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 CARS2Q9HA77 564 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 LRTM1Q9HBL6 345 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 LRFN2Q9ULH4 789 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 GPC6Q9Y625 555 aaPredicted RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 SYNDIG1LA6NDD5 238 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 RGS14O43566 566 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 VPS4BO75351 444 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 GBAP04062 536 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 LCKP06239 509 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 MSH3P20585 1137 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 TTPAP49638 278 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 MRPS15P82914 257 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 TRIM60Q495X7 471 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 RBM23Q86U06 439 aaKnown RBP13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 OR8H2Q8N162 312 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 NETO1Q8TDF5 533 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 TLR6Q9Y2C9 796 aa13.06□□□□□ -0.32
TNFRSF21-201ENST00000296861 TYW5A2RUC4 315 aaKnown RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 MBLAC1A4D2B0 266 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 PRMT5O14744 637 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 MYO1DO94832 1006 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 PRAMEF12O95522 483 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 MASP1P48740 699 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 EEFSECP57772 596 aaKnown RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 PURAQ00577 322 aaKnown RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 IL10RBQ08334 325 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 CCDC85BQ15834 202 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 PHKG1Q16816 387 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 NANOGNBQ7Z5D8 188 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 P2RY8Q86VZ1 359 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 SERPINA9Q86WD7 417 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 BARD1Q99728 777 aaKnown RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 CHCHD6Q9BRQ6 235 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 INPP5KQ9BT40 448 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 ADGRE3Q9BY15 652 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 MAGEE1Q9HCI5 957 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 TESMINQ9Y4I5 508 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 NINQ8N4C6 2090 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 PSMD11O00231 422 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 VIPP01282 170 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 ENO2P09104 434 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 WEE1P30291 646 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 GNPDA1P46926 289 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 CCL23P55773 120 aa13.05□□□□□ -0.32
TNFRSF21-201ENST00000296861 AQP6Q13520 282 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms