RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 SMG7Q92540 1137 aaKnown RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 ZFRQ96KR1 1074 aaKnown RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 MYRFLQ96LU7 910 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 PAK6Q9NQU5 681 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 OGDHLQ9ULD0 1010 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 OAZ3Q9UMX2 235 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 INVSQ9Y283 1065 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 PCDHB1Q9Y5F3 818 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 MAGED1Q9Y5V3 778 aaPredicted RBP9.12□□□□□ -0.95
PRDM9-201ENST00000296682 DGKBQ9Y6T7 804 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 BRWD1Q9NSI6 2320 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 PLXNB3Q9ULL4 1909 aa9.12□□□□□ -0.95
PRDM9-201ENST00000296682 E2F3O00716 465 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 ARPC2O15144 300 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 KRT6AP02538 564 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 STATHP02808 62 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 KRT6BP04259 564 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 CCR7P32248 378 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 NSG1P42857 185 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 KRT6CP48668 564 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 OR4D2P58180 307 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 POLR2LP62875 67 aaKnown RBP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 NFKB2Q00653 900 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 SLC5A9Q2M3M2 681 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 NANOGP8Q6NSW7 305 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 Q6ZSR9 355 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 GET4Q7L5D6 327 aaPredicted RBP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 RGL4Q8IZJ4 473 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 PARP8Q8N3A8 854 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 ITFG1Q8TB96 612 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 SDCCAG3Q96C92 435 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 NANOGQ9H9S0 305 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 LRTM1Q9HBL6 345 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 SPASTQ9UBP0 616 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 TBX21Q9UL17 535 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 AP1G1O43747 822 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 CTSAP10619 480 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 SLC6A2P23975 617 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 ACRV1P26436 265 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 GNPDA1P46926 289 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 CLCN7P51798 805 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 METAP1P53582 386 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 ERVK-8P63133 956 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 RHDQ02161 417 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 TMEM220Q6QAJ8 160 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 REM2Q8IYK8 340 aaPredicted RBP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 PAPOLBQ9NRJ5 636 aaKnown RBP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 ELOVL2Q9NXB9 296 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 DNMT3BQ9UBC3 853 aaKnown RBP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 BAG5Q9UL15 447 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 CHD7Q9P2D1 2997 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 PTPRSQ13332 1948 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 DIRAS1O95057 198 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 TSPAN12O95859 305 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 TIMP1P01033 207 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 S100A3P33764 101 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 VAC14Q08AM6 782 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 KANK2Q63ZY3 851 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 SUSD1Q6UWL2 747 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 HSD11B1LQ7Z5J1 315 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 MMAAQ8IVH4 418 aaKnown RBP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 OVCA2Q8WZ82 227 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 FAM120BQ96EK7 910 aaKnown RBP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 PHF12Q96QT6 1004 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 DUS2Q9NX74 493 aaKnown RBP9.11□□□□□ -0.95
PRDM9-201ENST00000296682 PDP2Q9P2J9 529 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 INSL6Q9Y581 213 aa9.11□□□□□ -0.95
PRDM9-201ENST00000296682 A0A1W2PP18 115 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 K7EPI3 171 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 PRKACGP22612 351 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 IL12AP29459 219 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 BDKRB1P46663 353 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 CYP4F2P78329 520 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 PTSQ03393 145 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 CHRNB3Q05901 458 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 SPIDRQ14159 915 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 SELPLGQ14242 412 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 RBM44Q6ZP01 1051 aaKnown RBP9.1□□□□□ -0.95
PRDM9-201ENST00000296682 EFL1Q7Z2Z2 1120 aaKnown RBP9.1□□□□□ -0.95
PRDM9-201ENST00000296682 ANKRD33Q7Z3H0 272 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 RAVER1Q8IY67 606 aaKnown RBP9.1□□□□□ -0.95
PRDM9-201ENST00000296682 RNF168Q8IYW5 571 aaPredicted RBP9.1□□□□□ -0.95
PRDM9-201ENST00000296682 FIBINQ8TAL6 211 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 HEPHQ9BQS7 1158 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 SEZ6LQ9BYH1 1024 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 OR2AG1Q9H205 316 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 LIN28AQ9H9Z2 209 aaKnown RBP9.1□□□□□ -0.95
PRDM9-201ENST00000296682 SPHK2Q9NRA0 654 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 EXD2Q9NVH0 621 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 KCTD5Q9NXV2 234 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 UBAP1Q9NZ09 502 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 NUDT4Q9NZJ9 180 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 ANAPC2Q9UJX6 822 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 ST14Q9Y5Y6 855 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 TMEM202A6NGA9 273 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 EI24O14681 340 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 CLOCKO15516 846 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 NOBOXO60393 691 aa9.1□□□□□ -0.95
PRDM9-201ENST00000296682 MMP20O60882 483 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms