RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 PTGFRNQ9P2B2 879 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 UBE2QL1A1L167 161 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 A8MX80 341 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 AURKAO14965 403 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 TOP3BO95985 862 aaKnown RBP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 TNFAIP8L3Q5GJ75 292 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 ASCC1Q8N9N2 400 aaKnown RBP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 NTAN1Q96AB6 310 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 ASB9Q96DX5 294 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 SIX2Q9NPC8 291 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 CRTAC1Q9NQ79 661 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 TRPC4Q9UBN4 977 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 PTBP2Q9UKA9 531 aaKnown RBP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF232Q9UNY5 417 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 KAT6AQ92794 2004 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 FUOMA2VDF0 154 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 LINC01553A4QN01 128 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 HEPACAM2A8MVW5 462 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 AP2A2O94973 939 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 DLDP09622 509 aaKnown RBP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 MAPK12P53778 367 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 SYT16Q17RD7 645 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 ZCCHC8Q6NZY4 707 aaKnown RBP11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 PAOXQ6QHF9 649 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 MARVELD2Q8N4S9 558 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 DCAKDQ8WVC6 231 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 SLCO2A1Q92959 643 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 Q96MT0 163 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNHIT2Q9UHR6 403 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 ITM2BQ9Y287 266 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 PRKAB1Q9Y478 270 aa11.19□□□□□ -0.62
NPC1L1-201ENST00000289547 H3BQ06 376 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 PLK4O00444 970 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 FFAR3O14843 346 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CASKO14936 926 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 GPR42O15529 346 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 BUD23O43709 281 aaKnown RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 NR2F6P10588 404 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CD36P16671 472 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 PSMA1P25786 263 aaKnown RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 BLKP51451 505 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 IL18Q14116 193 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF776Q68DI1 518 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 AFTPHQ6ULP2 937 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 GATA6Q92908 595 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 PSMG2Q969U7 264 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 MTFMTQ96DP5 389 aaKnown RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 MCCC1Q96RQ3 725 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ASB8Q9H765 288 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 HMGXB4Q9UGU5 601 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 C2CD4BA6NLJ0 364 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 FPGTO14772 594 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 SH3BGRLO75368 114 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 RSL1D1O76021 490 aaKnown RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 STBD1O95210 358 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CCNCP24863 283 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 GDF10P55107 478 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 IL10RBQ08334 325 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 TCEAL5Q5H9L2 206 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CLEC6AQ6EIG7 209 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 SULT1C3Q6IMI6 304 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 SYT12Q8IV01 421 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ITPKCQ96DU7 683 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 OR52B2Q96RD2 323 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 WDR90Q96KV7 1748 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CLIC3O95833 236 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CHRNGP07510 517 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 HOXB2P14652 356 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CTSKP43235 329 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 SLC9A3P48764 834 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 MXD1Q05195 221 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 BOP1Q14137 746 aaKnown RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 NDUFAF6Q330K2 333 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CERCAMQ5T4B2 595 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF438Q7Z4V0 828 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 TRIM43Q96BQ3 446 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CSPG4P5Q96PW8 444 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 SMOQ99835 787 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ZNF717Q9BY31 904 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 YTHDF1Q9BYJ9 559 aaKnown RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ADAM7Q9H2U9 754 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 MUC13Q9H3R2 512 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 NEK6Q9HC98 313 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 MAGEE1Q9HCI5 957 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CATSPERZQ9NTU4 200 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 PDP1Q9P0J1 537 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 RABL2BQ9UNT1 228 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 LAMB1P07942 1786 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 ISPDA4D126 451 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 NPC1O15118 1278 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 NOBOXO60393 691 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 LRCH4O75427 683 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 OXSR1O95747 527 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 CHRNB2P17787 502 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 LPOP22079 712 aaPredicted RBP11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 MGAT3Q09327 533 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 SEMA5AQ13591 1074 aa11.18□□□□□ -0.62
NPC1L1-201ENST00000289547 RUNDC3AQ59EK9 446 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms