RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PRKAA2P54646 552 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 C21orf59P57076 290 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 RACK1P63244 317 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 INPP5AQ14642 412 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 FAM83EQ2M2I3 478 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 CDKL4Q5MAI5 379 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 RASGRP3Q8IV61 690 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 NUDCD3Q8IVD9 361 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 MFSD2AQ8NA29 543 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 BIRC7Q96CA5 298 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 TPSD1Q9BZJ3 242 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 TRIM45Q9H8W5 580 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 GPAMQ9HCL2 828 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 ZSCAN32Q9NX65 697 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 NCDNQ9UBB6 729 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 ZNHIT2Q9UHR6 403 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 GTF2A1LQ9UNN4 478 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 A0A1W2PPM1 405 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 BIRC5O15392 142 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 H2AFYO75367 372 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 SLCO2B1O94956 709 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 RBP1P09455 135 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 BRAFP15056 766 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 RASGEF1AQ8N9B8 481 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 KLK6Q92876 244 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 TMEM159Q96B96 161 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 DACH2Q96NX9 599 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 NDNQ99608 321 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 DPEP2Q9H4A9 486 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 PLLPQ9Y342 182 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 V9GYQ6 96 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 CREBBPQ92793 2442 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 TP53BP1Q12888 1972 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 PRR33A8MZF0 331 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 FKBP9O95302 570 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 ZNF8P17098 575 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 GUCA1AP43080 201 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 GLRBP48167 497 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 RPL6Q02878 288 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 HSPA14Q0VDF9 509 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 KHDC1Q4VXA5 237 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 PMS2CLQ68D20 193 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 FKBP9P1Q75LS8 142 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 LPCAT2Q7L5N7 544 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 SLC22A15Q8IZD6 547 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 SDR16C5Q8N3Y7 309 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 FBXO15Q8NCQ5 510 aaPredicted RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 OR56A4Q8NGH8 313 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 MRPL57Q9BQC6 102 aaKnown RBP8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 ASPSCR1Q9BZE9 553 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 PCMTD2Q9NV79 361 aa8.26□□□□□ -1.09
PTPDC1-201ENST00000288976 SNUPNO95149 360 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 PAK4O96013 591 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 C2P06681 752 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 DHRS4L1P0CG22 281 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CD1DP15813 335 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 NFKB2Q00653 900 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 HIST2H2ACQ16777 129 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 HLA-DQA1Q5Y7H0 255 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 HIST2H2AA3Q6FI13 130 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 METTL2BQ6P1Q9 378 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 TRIM42Q8IWZ5 723 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CENPLQ8N0S6 344 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 PELI3Q8N2H9 469 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 MIPOL1Q8TD10 442 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 DENND1AQ8TEH3 1009 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 ASZ1Q8WWH4 475 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 OTUB1Q96FW1 271 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 BMFQ96LC9 184 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 GPR78Q96P69 363 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 GPR21Q99679 349 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 OR2AG1Q9H205 316 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 RDH14Q9HBH5 336 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CYP4F12Q9HCS2 524 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 GNG14A0A1W2PPG7 69 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 SLC5A10A0PJK1 596 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 SRRM3A6NNA2 597 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 GPR39O43194 453 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 GPR37L1O60883 481 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 PIAS1O75925 651 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CEACAM5P06731 702 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 ESRRAP11474 423 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 KRT20P35900 424 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 IL2P60568 153 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CDKL1Q00532 357 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CSTF1Q05048 431 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 OTOAQ7RTW8 1153 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 SIDT2Q8NBJ9 832 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 ACVR1CQ8NER5 493 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 C1orf216Q8TAB5 229 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 SETD7Q8WTS6 366 aaKnown RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CXorf40BQ96DE9 158 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CCDC90BQ9GZT6 254 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 CAB39LQ9H9S4 337 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 EBF2Q9HAK2 575 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 IL1RL2Q9HB29 575 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 SUSD2Q9UGT4 822 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 A0A1W2PR77 199 aa8.25□□□□□ -1.09
PTPDC1-201ENST00000288976 PRSS38A1L453 326 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms