RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 SNX3O60493 162 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 CATP04040 527 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 CSF2P04141 144 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 SLC35G4P0C7Q5 338 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 GFAPP14136 432 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 NCF1P14598 390 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 GRK2P25098 689 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 AK4P27144 223 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 NUBP1P53384 320 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 PRKAA2P54646 552 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 C21orf59P57076 290 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 DNAJB13P59910 316 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 ILF3Q12906 894 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 STX3Q13277 289 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 PFKFB4Q16877 469 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 UNC5DQ6UXZ4 953 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 CCL4L1Q8NHW4 92 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 MCOLN3Q8TDD5 553 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 GPBAR1Q8TDU6 330 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 PHF21BQ96EK2 531 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 C7orf26Q96N11 449 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 ELAC2Q9BQ52 826 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 COL25A1Q9BXS0 654 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 ZNF395Q9H8N7 513 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 TMEM74BQ9NUR3 256 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 SUSD2Q9UGT4 822 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 WDR37Q9Y2I8 494 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 ATXN2Q99700 1313 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 GALR2O43603 387 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 SNX2O60749 519 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 C1orf105O95561 183 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 HIST1H2AGP0C0S8 130 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 NME1P15531 152 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 JUNDP17535 347 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 HIST1H2ADP20671 130 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 MAP4P27816 1152 aaKnown RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 CDKL1Q00532 357 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 ASPHQ12797 758 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 SIM2Q14190 667 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 UAP1L1Q3KQV9 507 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 WASH2PQ6VEQ5 465 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 NRROSQ86YC3 692 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 FBXO39Q8N4B4 442 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 PDPRQ8NCN5 879 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 PPP1R14CQ8TAE6 165 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 TFGQ92734 400 aaPredicted RBP18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 GRAMD1AQ96CP6 724 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 HIST1H2AHQ96KK5 128 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 RMDN2Q96LZ7 410 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 HIST1H2AJQ99878 128 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 H2AFJQ9BTM1 129 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 WASH6PQ9NQA3 447 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 THAP1Q9NVV9 213 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 NCKIPSDQ9NZQ3 722 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 LRP4O75096 1905 aa18.45■□□□□ 0.54
PDLIM3-202ENST00000284770 ARHGEF33A8MVX0 844 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 GUCA1CO95843 209 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 S100BP04271 92 aaPredicted RBP18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 CTSEP14091 401 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 ARRB2P32121 409 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 ACTR1BP42025 376 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 ALDH18A1P54886 795 aaKnown RBP18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 AP1S2P56377 157 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 ACTR1AP61163 376 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 CDKL4Q5MAI5 379 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 GKAP1Q5VSY0 366 aaPredicted RBP18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 SLC30A9Q6PML9 568 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 ATG14Q6ZNE5 492 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 PTGR2Q8N8N7 351 aaPredicted RBP18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 FBXO15Q8NCQ5 510 aaPredicted RBP18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 GATA5Q9BWX5 397 aaPredicted RBP18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 GSDMCQ9BYG8 508 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 CAAP1Q9H8G2 361 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 PRDM8Q9NQV8 689 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 ARL15Q9NXU5 204 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 TBC1D29Q9UFV1 150 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 APOBEC3BQ9UH17 382 aaKnown RBP18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 PCOLCE2Q9UKZ9 415 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 ASF1AQ9Y294 204 aa18.44■□□□□ 0.54
PDLIM3-202ENST00000284770 KMT2EQ8IZD2 1858 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 PABPN1LA6NDY0 278 aaKnown RBP18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 PDZK1P1A8MUH7 402 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 STX16-NPEPL1H3BU86 382 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 STX16O14662 325 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 ITM2AO43736 263 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 H2AFYO75367 372 aaKnown RBP18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 IMPDH1P20839 514 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 SLC1A6P48664 564 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 NAGLUP54802 743 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 TCEA2Q15560 299 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 PEAR1Q5VY43 1037 aaPredicted RBP18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 ABRAXAS1Q6UWZ7 409 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 RAB44Q7Z6P3 723 aaPredicted RBP18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 SYT12Q8IV01 421 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 SEC16BQ96JE7 1060 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 INSM2Q96T92 566 aaPredicted RBP18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 EGFL8Q99944 293 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 USP34Q70CQ2 3546 aa18.43■□□□□ 0.54
PDLIM3-202ENST00000284770 A0A1B0GVT2 93 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms